| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2862 |
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| Symbol | |
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| ID | 6875134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2736908 |
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| End bp | 2738371 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642785913 |
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| Product | TPR repeat-containing protein YfgC |
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| Protein accession | YP_002216563 |
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| Protein GI | 198242783 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGGC AGTTGAAAAA AAACCTGGTG GCAACCCTCA TTGCAGCATT GGCTCTCGGT
CAGGTCGCGC CCGCATTTGC CGACCCTGCC GACACGCTGC CCGATATGGG AACCTCGGCA
GGAAGCACGC TTTCTATCGG ACAAGAGATG CAAATGGGCG ACTTTTATGT GCGCCAGCTA
CGCGGCAGCG CGCCGTTAAT CAACGATCCG CTGCTGGTGC AATACATTAA CGCGCTGGGT
ATGCGTCTGG TCTCGCACGC CGACTCCGTC AAAACGCCCT TCCATTTTTT CTTGATCAAT
AATGACGAAA TCAACGCCTT CGCGTTCTTT GGCGGCAATG TGGTGCTGCA CTCGGCGCTT
TTTCGCTACG CGGATAACGA AAGCCAGCTA GCTTCAGTCA TGGCGCATGA AATCTCCCAC
GTGACGCAGC GCCACCTGGC GCGCGCGATG GAAGATCAAA AGCGCAGCGC GCCGCTTACC
TGGGTGGGCG CGCTGGGTTC CATTTTGCTG GCCATGGCCA GCCCACAGGC CGGTATGGCG
GCGCTAACCG GTACTCTGGC GGGAACGCGC CAGGGAATGA TAAGTTTCAC CCAGCAAAAT
GAGCAAGAAG CCGACCGTAT TGGTATTCAG GTACTGCAAC GCGCCGGATT TGACCCACAG
GCGATGCCCT CTTTCCTCGA AAAACTGCTC GACCAGGCGC GTTACTCCAC GCGTCCGCCT
GAAATTTTGC TCACTCACCC CTTACCGGAA AGCCGCCTTG CGGATGCCCG CAACCGTGCC
AACCAGATGC GCCCGGTCGT GGTGCAATCT TCCGCCGACT TTTATTTCGC CAAAGCGCGC
GCCCTGGGAA TGTACAATTC CGGACGTAAC CAGCTCACCA GCGACCTGCT GGATCAGTGG
TCTAAAGGCA ACGTGCGTCA GCAACATGCG GCGCAATATG GCCGGGCGTT GCAGGCGATG
GAAGCGAGCA AGTACGATGA AGCGCGCAAA ACGTTGCAGC CGCTGTTAAG CGCAGAACCG
AACAATGCCT GGTATCTTGA CCTCGCCACC GATATTGACC TCGGGCAGAA AAGAGCCAAC
GACGCGATTA ATCGCCTGAA AAATGCCCGC GATCTGCGCG TTAATCCTGT GCTGCAGTTA
AACCTCGCCA ATGCGTACCT CCAGGGAGGC CAGCCAAAAG CGGCGGAAAC CATTCTGAAT
CGCTACACCT TTAGCCATAA AGATGACGGT AACGGCTGGG ATCTGCTTGC TCAGGCCGAA
GCCGCGCTGA ACAACCGCGA TCAGGAGCTG GCGGCGCGCG CTGAAAGTTA TGCGCTGGCG
GGACGACTGG ATCAGGCAAT TTCACTGCTC AGTAGCGCCA GCGCCCAGGC AAAACTGGGT
AGCCAGCAAC AGGCGCGTTA CGATGCGCGT ATCGACCAGC TGCGCCAGTT ACAGGAACGC
TTCAAGCCAT ACACGAAAAT GTAA
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| Protein sequence | MFRQLKKNLV ATLIAALALG QVAPAFADPA DTLPDMGTSA GSTLSIGQEM QMGDFYVRQL
RGSAPLINDP LLVQYINALG MRLVSHADSV KTPFHFFLIN NDEINAFAFF GGNVVLHSAL
FRYADNESQL ASVMAHEISH VTQRHLARAM EDQKRSAPLT WVGALGSILL AMASPQAGMA
ALTGTLAGTR QGMISFTQQN EQEADRIGIQ VLQRAGFDPQ AMPSFLEKLL DQARYSTRPP
EILLTHPLPE SRLADARNRA NQMRPVVVQS SADFYFAKAR ALGMYNSGRN QLTSDLLDQW
SKGNVRQQHA AQYGRALQAM EASKYDEARK TLQPLLSAEP NNAWYLDLAT DIDLGQKRAN
DAINRLKNAR DLRVNPVLQL NLANAYLQGG QPKAAETILN RYTFSHKDDG NGWDLLAQAE
AALNNRDQEL AARAESYALA GRLDQAISLL SSASAQAKLG SQQQARYDAR IDQLRQLQER
FKPYTKM
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