Gene SeD_A2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2854 
Symbol 
ID6872542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2728524 
End bp2729558 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content58% 
IMG OID642785905 
Productlipoprotein 
Protein accessionYP_002216555 
Protein GI198244965 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACT CAGTACAAAA GTCGCGCCTG GCGAAGGTTG CGGGTGTTTC GCTTGTTTTG 
CTGCTCGCTG CCTGTAGTTC CGATTCGCGC TACAAGCGCC AGGTAAGCGG CGATGAATCC 
TATCTGGATG CCGCGCCGCT TGCTGAACTT CACGCCCCGG CAGGAATGAT CCTGCCGATA 
ACGACCGGCG ACTACGTTAT TCCGGTCACG AAGGGGAGCG GCGCGGTTGG TAAGGCGTTG 
GATATCCGTC CGCCAGCGCA GCCGTTAGCG TTAGTGAGCG GCGCGCGTAC CCAGTTCTCT 
GGCGATACCG CTACGCTATT GGTGGAAAAT GGTCGTAGCA GCACGCTGTG GCCGCAAGTC 
GTCAGCGTGC TTCAGGCGAA AAATTATCCG ATTGAAAAAC GTGACGATGC CAGCCAGACC 
CTGACGACCG ATTGGGTGAG CTGGAACCGC CTGGATGAAG ACGAACAGTA TCGTGGACGT 
TATCAAATCT CGGTGAAGCC GCAGGGCTAT CAGCAGGCGG TAACGGTAAA ACTGGTTAAT 
CTGGAACAGG CTGGCAAGCC GGTCGCTGAC GCGGCGTCGC TGCAGCGCTA TAGCACGGAA 
ATGATGAACG TCATTTCCGC CGGTCTGGAT AAGACCGCTA CGGATGCGGC AAATGCCGCG 
CAGAACCGTT CCGCCGCAAC GATGGATGTG CAGAGCGCCG CTGATGATAC CGGTTTACCT 
ATGCTGGTCG TTCGCGGTCC GTTCAACCTC GTGTGGCAAC GCCTCCCGGC CGCGCTGGAA 
AAAGTGGGCA TGAAAGTCAC CGACAGCACT CGCTCTCAGG GCAGCATGGC GGTAACGTAC 
AAACCGTTGT CTGACAGCGA CTGGCGGGAT CTGGGCGCTA GCGACCCGGG CCTGGCATCC 
GGAGACTATA AGTTGCAGGT CGGCGATTTA GATAACCGCA GCAGCTTGCA GTTTATCGAT 
CCTAAGGGGC ATACTCTGAC GCAAAGCCAG AACGACGCGC TGGTTGCCGT CTTCCAGGCA 
GCGTTCAACA AGTAA
 
Protein sequence
MAYSVQKSRL AKVAGVSLVL LLAACSSDSR YKRQVSGDES YLDAAPLAEL HAPAGMILPI 
TTGDYVIPVT KGSGAVGKAL DIRPPAQPLA LVSGARTQFS GDTATLLVEN GRSSTLWPQV 
VSVLQAKNYP IEKRDDASQT LTTDWVSWNR LDEDEQYRGR YQISVKPQGY QQAVTVKLVN 
LEQAGKPVAD AASLQRYSTE MMNVISAGLD KTATDAANAA QNRSAATMDV QSAADDTGLP 
MLVVRGPFNL VWQRLPAALE KVGMKVTDST RSQGSMAVTY KPLSDSDWRD LGASDPGLAS 
GDYKLQVGDL DNRSSLQFID PKGHTLTQSQ NDALVAVFQA AFNK