Gene SeD_A2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2846 
Symbol 
ID6873207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2717294 
End bp2718994 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content54% 
IMG OID642785897 
Productnitrate/nitrite sensor protein NarQ 
Protein accessionYP_002216547 
Protein GI198243408 
COG category[T] Signal transduction mechanisms 
COG ID[COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTTA AACGCCCGGT CTCGGCCAGT CTGGCTAAGG CTTTTTTCTA TATTGTGCTG 
TTGTCTATTC TGTCCACCGG CAGCGCATTA CTGACGCTGA CCAGCAGTTT ACGGGATGCC
GAAGCGATCA ATATCGCCGG TTCGCTACGA ATGCAGAGCT ATCGGCTGGG TTACGATCTG
CAAAGCCGTA GCCCGCAGAT TAATGCGCAT CGTCAACTTT TCCAGCACGC GCTCAACTCG
CCGGTACTGC AAAATCTCAA CGCCTGGTAT GTGCCGCAGG CGGTGAAAAC TCGCTACGCG
CGCCTGCACG CCAACTGGCT GGAGATGAAT AGCCGCCTAC AGGACGGCGA CATTGCCTGG
TATCAGACCA ATATCAACAA TTACGTCGAT CAAATTGATC TCTTCGTTCT GGCATTACAG
CATTACGCCG AGCGTAAAGT CATGCTGGTC GTCGCCATAT CGCTGGCGGG CGGTATCGGC
ATATTTACGC TGGTCTTTTT TACCCTACGA CGTATTCGCC AGCAGGTCGT TCGCCCGCTG
AATCAACTGG TCACCGCCAG TCAGCGAATT GAACATGGTC AGTTCGCCCC GCTGCCGCTG
GATACCAGCT TACCCAATGA GCTGGGATTG TTGGCGAAAA CGTTTAGTCA GATGTCGAGC
GAGCTGCATA AACTTTATCG TTCGCTGGAA GCCTCGGTGG AAGAAAAAAC GCACGATCTG
CACGAAGCGC ACCGCCGCCT GGAGGTGTTA TACCAGTGCT CCCAGGCGCT GAATACCAGC
CAAATCGACG TCCACTGTTT TCGCCATATT TTGCAAATTG TCCGTGAACA TGACGCCGCC
TGGTATCTGG AGTTAACCGT GGGCGATAAC TGGCGGATTA GCGAAGGCAT GCAAAGCCCC
GACCTGCCGA TGCAAATGCT GCCAGTGACG ATGCAGGACA CGGTCTATGG CGAACTCCAC
TGGCAAAGCC CCAACGTTAA TGCCTCTACG CCGCTGCTGA ACAGCGTCTC CACGATGCTG
GGGCGTGGTT TGTACTTTAA TCAGGCGCAA AAACACTTCC AGCAACTTTT GTTAATGGAA
GAGCGCGCGA CGATTGCCCG TGAGCTACAC GATTCGCTGG CGCAGGTACT TTCTTATTTA
CGTATTCAGT TAACGCTTTT GAAGCGCGCC ATTCCAGAAG ATAACGCCGG CGCGCAAAGC
ATCATGGCGG ATTTTTCCAG AGCGCTGAAC GACGCCTACC GTCAGCTTCG CGAGCTACTC
ACCACGTTCC GTCTGACGTT ACAGCAGGCC GATTTACCCT CCGCATTGCA TGAGATGCTG
GAAGATTTAC AGAGTCAGAC CCCGGCCAAA CTCACGTTGG ATTGCCGTTT ACCCACGCTG
GCGCTGGATG CGCAAATGCA GGTGCATTTG TTGCAAATTG TGCGTGAAGC GGTCCTGAAC
GCCATTAAAC ACGCCAACGC GAGCGAAATC GCCGTGAGCT GCGTCACCGC GCCTGACGGC
GATCATACCG TTTATATTCG CGATAATGGC ATTGGTATCG GCGAACCGCA TGAGCCTGCC
GGACACTATG GTCTGAATAT AATGCGTGAG CGCGCGGAGC GCCTTGGCGG CACGCTGAAT
TTTTCGCAAC CCTCCGGCGG CGGCACGCTG GTCAGTATCA GTTTTCGCTC CTCCAACAAG
GAAGAGAGTC AGTTAACGTA A
 
Protein sequence
MTVKRPVSAS LAKAFFYIVL LSILSTGSAL LTLTSSLRDA EAINIAGSLR MQSYRLGYDL 
QSRSPQINAH RQLFQHALNS PVLQNLNAWY VPQAVKTRYA RLHANWLEMN SRLQDGDIAW
YQTNINNYVD QIDLFVLALQ HYAERKVMLV VAISLAGGIG IFTLVFFTLR RIRQQVVRPL
NQLVTASQRI EHGQFAPLPL DTSLPNELGL LAKTFSQMSS ELHKLYRSLE ASVEEKTHDL
HEAHRRLEVL YQCSQALNTS QIDVHCFRHI LQIVREHDAA WYLELTVGDN WRISEGMQSP
DLPMQMLPVT MQDTVYGELH WQSPNVNAST PLLNSVSTML GRGLYFNQAQ KHFQQLLLME
ERATIARELH DSLAQVLSYL RIQLTLLKRA IPEDNAGAQS IMADFSRALN DAYRQLRELL
TTFRLTLQQA DLPSALHEML EDLQSQTPAK LTLDCRLPTL ALDAQMQVHL LQIVREAVLN
AIKHANASEI AVSCVTAPDG DHTVYIRDNG IGIGEPHEPA GHYGLNIMRE RAERLGGTLN
FSQPSGGGTL VSISFRSSNK EESQLT