| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2843 |
|---|
| Symbol | |
|---|
| ID | 6872113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2712621 |
|---|
| End bp | 2713196 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642785894 |
|---|
| Product | putative hydrolase YffH |
|---|
| Protein accession | YP_002216544 |
|---|
| Protein GI | 198244300 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAA CCATTACGCT TATTAAGGAT AAAATTCTTT CTGATAATTA TTTTACTCTG
CGCAACATTA CCTATGACCT GACCCGTCGT AATGGCGAGG TTATCCGTCA CAAGCGTGAG
GTTTACGATC GCGGGAATGG CGCAACCATT CTGCTTTACA ACTCAACTAA AAAAACCGTG
GTTCTGGTTC GCCAGTTTCG CGTGGCGACA TGGGTCAATG GTAATCAAGA CGGTATGTTA
ATTGAAACCT GCGCTGGCCT GCTTGATAAC GACGAGCCGG AGGTCTGTAT CCGTAAAGAG
GCCATTGAAG AGACAGGGTA TGACGTTGGT GAGGTACGCA AGATATTTGA GCTGTATATG
TCGCCAGGCG GCGTCACGGA GCTGATTCAT TTCTTCATTG CCGAATATCA TGATAGCGAG
CGTGCCAGCA TCGGCGGCGG CGTGGAGGAC GAAGAGATTG AGGTGCTTGA ACTGCCGTTT
TCCCGGGCGC TGGAAATGGT GCGCTCAGGC GAGATTCGGG ACGGTAAGAC CGTGTTATTG
CTTAACTATT TACAGACGTC TCATCTAATG GACTGA
|
|---|
| Protein sequence | MSQTITLIKD KILSDNYFTL RNITYDLTRR NGEVIRHKRE VYDRGNGATI LLYNSTKKTV
VLVRQFRVAT WVNGNQDGML IETCAGLLDN DEPEVCIRKE AIEETGYDVG EVRKIFELYM
SPGGVTELIH FFIAEYHDSE RASIGGGVED EEIEVLELPF SRALEMVRSG EIRDGKTVLL
LNYLQTSHLM D
|
|---|
| |