Gene SeD_A2840 details

Gene Information

• Locus tag: SeD_A2840
• Symbol: tkt
• ID: 6871457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 2709032
• End bp: 2711032
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642785891
• Product: transketolase
• Protein accession: YP_002216541
• Protein GI: 198246103
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 77
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCCGTA AAGACCTTGC CAATGCGATT CGTGCGCTGA GCATGGATGC CGTTCAAAAA 
GCCAATTCCG GGCACCCCGG CGCGCCGATG GGGATGGCGG ATATCGCTGA AGTGCTATGG 
AACGATTTTC TTAAACATAA CCCCACCGAT CCGACCTGGT ATGACCGTGA TCGTTTTATC 
CTTTCCAACG GTCACGCCTC CATGCTGCTC TATAGTCTGC TGCATTTAAC CGGTTATGAC 
CTGCCGCTGG AGGAGTTAAA AAACTTCCGT CAACTGCACT CTAAAACGCC AGGTCACCCG 
GAGATTGGCT ATACGCCCGG CGTTGAAACC ACCACCGGAC CGCTGGGCCA GGGGCTGGCG 
AATGCCGTCG GGCTGGCGAT TGCCGAGCGT ACGTTAGGCG CACAGTTCAA CCGGCCGGAC 
CATGAGATTG TCGACCACTA CACCTATGTC TTTATGGGCG ACGGCTGTCT GATGGAGGGG 
ATCTCGCATG AGGTGTGTTC GCTGGCTGGT ACGCTGGGAC TGGGCAAACT GATCGGCTTT 
TACGATCACA ACGGCATCTC CATTGATGGC GAAACCGAAG GCTGGTTTAC CGACGATACC 
GCCAAACGTT TTGAAGCCTA CCACTGGCAT GTCGTGCATG ACATTGACGG GCACGATCCG 
GAAGCGGTGA AAAAAGCCAT TCTCGAAGCC CAGAGCGTAA AAGATAAACC TTCGCTAATT 
ATCTGTCGGA CGGTGATAGG TTTTGGCTCG CCGAATAAAG CCGGGAAGGA GGAGTCGCAC 
GGCGCGGCGC TGGGCGAAGA AGAGGTGGCG CTGACCCGCC AGAAGCTGGG ATGGCATCAT 
CCGGCGTTTG AGATCCCAAA AGAGATTTAC CGCGCGTGGG ATGGCCGTGA AAAAGGCGAG 
AAAGCGCAGC AGCAGTGGCA GGAAAAGTTT GCTGCTTATG AGAAGGCTTA TCCTGAGCTG 
GCCGCGGAGT TTACCCGCCG GATGAGCGGC GGACTGCCGG AGGCATGGGA ATCCGCCACG 
CAAAAATTTA TTAACGACTT GCAGGCTAAT CCGGCCAAAA TCGCCACCCG TAAAGCATCG 
CAAAATACGC TCAATGCCTA CGGTCCCCTG TTGCCGGAAC TGTTGGGCGG ATCGGCGGAT 
CTGGCGCCGA GCAACCTGAC TATCTGGAAA GGTTCGACCT CGTTGAAAGA GGATCCGGCA 
GGTAATTATA TCCACTATGG CGTGCGCGAA TTCGGCATGA CCGCCATTGC CAACGGCATC 
GCCCACCACG GCGGCTTTGT ACCGTATACC GCCACGTTTC TGATGTTTGT CGAATATGCG 
CGTAACGCGG CGCGTATGGC GGCCTTAATG AAAGCCCGGC AGATTATGGT CTATACCCAC 
GACTCCATCG GTTTAGGCGA AGATGGCCCG ACGCACCAGG CCGTGGAACA ACTGGCGAGC 
CTGCGCTTAA CGCCAAACTT CAGCACCTGG CGTCCCTGCG ATCAGGTTGA GGCGGCGGTC 
GGCTGGAAGC TGGCCATTGA ACGTCAGCAC GGGCCGACGG CGTTGATTCT CTCGCGGCAA 
AATCTGGCGC AGGTGGAACG CACGCCGGAA CAGGTGAAAG CGATTGCCCG CGGCGGTTAT 
ATTCTGAAAG ATAGCGGCGG CAAGCCGGAT ATCATTCTGA TCGCTACCGG ATCGGAAATG 
GAAATTACCC TCCAGGCGGC GGAAAAATTG ACTGGCGAGG GGCATAACGT TCGCGTGGTG 
TCGTTGCCTT CAACGGATAT TTTCGATGCG CAGGACGAGG CATATCGCGA ATCTGTGCTA 
CCGGCGCACG TGACCGCCCG CGTCGCGGTG GAAGCCGGTA TAGCCGACTA CTGGTATAAA 
TATGTTGGCC TAAAAGGCGC AATTATCGGC ATGACGGGAT ACGGTGAATC CGCCCCGGCT 
GACAAACTGT TCCCGTATTT TGGCTTTACC GTGGAAAATA TTGTAGAAAA AGCCCGCCGG 
GTGCTGAACA TCAAAGGCTA A 

 

Protein sequence

MSRKDLANAI RALSMDAVQK ANSGHPGAPM GMADIAEVLW NDFLKHNPTD PTWYDRDRFI 
LSNGHASMLL YSLLHLTGYD LPLEELKNFR QLHSKTPGHP EIGYTPGVET TTGPLGQGLA 
NAVGLAIAER TLGAQFNRPD HEIVDHYTYV FMGDGCLMEG ISHEVCSLAG TLGLGKLIGF 
YDHNGISIDG ETEGWFTDDT AKRFEAYHWH VVHDIDGHDP EAVKKAILEA QSVKDKPSLI 
ICRTVIGFGS PNKAGKEESH GAALGEEEVA LTRQKLGWHH PAFEIPKEIY RAWDGREKGE 
KAQQQWQEKF AAYEKAYPEL AAEFTRRMSG GLPEAWESAT QKFINDLQAN PAKIATRKAS 
QNTLNAYGPL LPELLGGSAD LAPSNLTIWK GSTSLKEDPA GNYIHYGVRE FGMTAIANGI 
AHHGGFVPYT ATFLMFVEYA RNAARMAALM KARQIMVYTH DSIGLGEDGP THQAVEQLAS 
LRLTPNFSTW RPCDQVEAAV GWKLAIERQH GPTALILSRQ NLAQVERTPE QVKAIARGGY 
ILKDSGGKPD IILIATGSEM EITLQAAEKL TGEGHNVRVV SLPSTDIFDA QDEAYRESVL 
PAHVTARVAV EAGIADYWYK YVGLKGAIIG MTGYGESAPA DKLFPYFGFT VENIVEKARR 
VLNIKG