Gene SeD_A2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2816 
SymbolamiA 
ID6875226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2686578 
End bp2687447 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content51% 
IMG OID642785870 
ProductN-acetylmuramoyl-l-alanine amidase I 
Protein accessionYP_002216520 
Protein GI198242319 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.474935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT TTAAACTCCT AAAAACTCTC ACATCGCGCC GCCAGGTACT CAAAACAGGT 
CTGGCGGCCC TGACGCTGTC AGGTATGTCG CACGCAGTAG CCAAAGAAGA AACGCTAAAA
ACCAGTAATG GTCACAGCAA ACCCAAAACC AAAAAAACCG GCAGTAAACG GTTGGTGATG
CTCGACCCCG GACACGGCGG CATCGATACC GGCGCGATTG GCCGCAACGG TTCTCAGGAA
AAACACGTCG TGCTGGCAAT TGCCAAAAAC GTACGCGCTA TTTTGCGAAA TCACGGAATC
GATGCGCGTT TAACCCGGAC AGGGGATACC TTTATTCCGC TGTACGATCG GGTGGAAATC
GCCCATAAGC ACGGCGCGGA TCTGTTTATG TCTATTCATG CCGATGGTTT TACCAACCCG
AAAGCAGCGG GCGCTTCCGT TTTTGCGCTT TCCAACCGCG GGGCCAGTAG CGCCATGGCG
AAGTATCTCT CCGAGCGTGA AAACCGCGCG GACGAAGTGG CGGGTAAAAA AGCCACTGAC
CGGGATCATC TATTACAACA AGTTTTGTTT GATCTGGTGC AAACCGATAC GATTAAAAAC
AGTCTGACGC TGGGTTCGCA TATTCTCAAG AAAATCAAAC CTATACATAA ATTACACAGC
CGCACTACCG AACAAGCGGC TTTCGTGGTG CTAAAATCAC CGTCAATTCC GTCGGTACTG
GTCGAAACCT CGTTTATTAC CAATCCGGAA GAAGAACGCC TGCTGGGCAC GACGGCGTTT
CGCCAGAAAA TCGCTACGGC GATCGCCAAC GGCATCATCA GTTATTTTCA CTGGTTTGAT
AATCAGAAAG CACACACGAA GAAACGGTAA
 
Protein sequence
MSTFKLLKTL TSRRQVLKTG LAALTLSGMS HAVAKEETLK TSNGHSKPKT KKTGSKRLVM 
LDPGHGGIDT GAIGRNGSQE KHVVLAIAKN VRAILRNHGI DARLTRTGDT FIPLYDRVEI
AHKHGADLFM SIHADGFTNP KAAGASVFAL SNRGASSAMA KYLSERENRA DEVAGKKATD
RDHLLQQVLF DLVQTDTIKN SLTLGSHILK KIKPIHKLHS RTTEQAAFVV LKSPSIPSVL
VETSFITNPE EERLLGTTAF RQKIATAIAN GIISYFHWFD NQKAHTKKR