Gene SeD_A2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2784 
Symbol 
ID6875827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2658638 
End bp2659522 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content51% 
IMG OID642785838 
ProductDNA-binding transcriptional activator XapR 
Protein accessionYP_002216488 
Protein GI198245989 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00240936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAG CCCATCGTAT TGATCTAAAG CTATTACGTT ATTTCCTCGC TGTTGCAGAA 
GAATTGCATT TTGGCCGGGC TGCTGCCCGG TTAAATATGT CACAACCTCC CTTGAGTATC 
CATATCAAAG AACTTGAACA GCAACTGGGT ACATTGCTGT TTATCCGTCA TTCCCGCAGC 
GTTGCATTAA CCCATGCCGG GAAAGTTTTG ATGGAAGAGT CACGTCGCTT GTTAGCCAAT 
GCAAATCAGG CGCTGGCGCG AGTGGAGCAG ATTGGTCGCG GTGAAGCGGG GCGCATTGAA 
CTGGGTGTGG TTGGTACGGC GCTGTGGGGA AGAATGCGTC CTGCGATGCG TCACTTTTTG 
AAAGCGAATC CCAATGTTGA AGTACTTTTT CGCGAAAAGT CTCCAGGTAT GCAAATGGCG 
TTGTTAGAGC GTCGGGAACT TGATGCAGGG ATCTGGCGTA TGGCTATCGA ACCAGCAGTC 
GGTTTTACCA GCATACGTTT GCATGAATCT GCATTCATGG TTGCAGTTCC GGAAGATCAC 
GATCTGGCAT CCAGAGATTC TGTGCCGTTG GCGGCGTTGC GCAATGAATA TTTTGTTACG 
TTGCCTTCCG TACATTCTGA TTGGGGATTT TTACAACGTG TATGCCAACA GGCGGGTTTC 
TCGCCAATGA TTATTCGGGA AGTGGTTGAG CCGCAAACGG TGTTGGCGAT GATCAGTATG 
GGGATCGGGA TTACGTTGAT GGCTGATGGC TATGCGCAAA TGAGCTGGCC GGGTGTGGTG 
TTCCGTCCGT TAGAGGAACG TATTCCGGCG GATTTGTATA TTGTGTATGA CCAGCAGCAG 
GCAACGCCAG CGCTGGAGAA ACTGGTGGCG GCGTTGACGG TATGA
 
Protein sequence
MERAHRIDLK LLRYFLAVAE ELHFGRAAAR LNMSQPPLSI HIKELEQQLG TLLFIRHSRS 
VALTHAGKVL MEESRRLLAN ANQALARVEQ IGRGEAGRIE LGVVGTALWG RMRPAMRHFL 
KANPNVEVLF REKSPGMQMA LLERRELDAG IWRMAIEPAV GFTSIRLHES AFMVAVPEDH 
DLASRDSVPL AALRNEYFVT LPSVHSDWGF LQRVCQQAGF SPMIIREVVE PQTVLAMISM 
GIGITLMADG YAQMSWPGVV FRPLEERIPA DLYIVYDQQQ ATPALEKLVA ALTV