| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2774 |
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| Symbol | |
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| ID | 6873967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2652700 |
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| End bp | 2654889 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642785828 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_002216484 |
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| Protein GI | 198244115 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATA AGTGTAACGT ATTAAAAAAT ATAAAAATAT TTTTACTGGC CTTCTGCCTG
ACCGTTCCGG CTATTCTGCT ATCTCGTCTC ATTTCTCCCC GCGCCACAAT TGATTCCAGC
TATATCTTTC TGGCCTGGCT ACCGCTCTGC GTCATGTTTT CCGTGCTGTT TTTATTTGGC
CGCCGTGGCG TCGCGCCGAT GGTAGGCGGA ATGATGTTGA CTAATGAATG GAATTTTCAT
TTACCTCTGC CACAGGCGAT GGTGCTGCTA TTTTGCCAGA CGTTTCCCGT GTTGCTGGTT
TGCGCTATCG TACGCTGGCA GCTGGGCGCG CGCTGGCGCT ACGGAATACC CAACCAAGGC
ATCTGGCTAC GCGTTTTCTG GTTAGGGTTA ATGACGCCGT TTGGCATAAA AATCAGTATG
CATCTGGCGG GGCACTACCT GGCTTTCCCG GTGACAATCT CTACCTTCTT TGGCACCGGC
ACCGCTATTT TCTCGATTGT TGATTTATTG AGTCTGATTT CTGCCGCGCT TATTTTTACC
CTCTTTTTCT ATTATCCGCT GCGGATGATA GTCAGCCCGC ACTATATTCG TATTTTCTGG
CGGAGGGATG TCGCTCCTTA TCTCGCCAAA GAAAAACGCC TGTTTACGCT TCTCTGGTTT
GCCACTCTGG CGACGCTATT AGCGGTGCTG TGTACGCCTT TCGAGACAAA GTATATTGCT
GGCTATCTGG TGCCAGTTCT GTTCATTGGA TTTACCATCG GCGTGGGGAA AATCAGCTAT
CCGCTGTTGA ATTTTAGTTG GGCTCTCACT GCGCTATTCC TGCTTAGCTA TAACCGCAAT
TTTCTGCAGG GCGTGGGCTC AGAATATTCG CTGGCATTTA TCCTTTCAGT TCTCATTTCT
TTTAGTATTT GTTTGTTGTA CATGGCGCGG ATTAATCAGC GTAGCGAATG GTTGAATCGA
CAGTGGCACT CGCAGGCATT AACCGATCCG TTGACGCAAC TGCCTAACCT GCGTGCGCTG
GAGCAGTTTC TTTTACAGGA TGCCGGGCAA AGCGTGTGTT ATCTACGCAT GGAAAACCTG
GAATTTCTGA GCCGTCATTA CGGTATGCAG ATGCGCGTGC ATTGCGAACG CGAGGTGTTT
CGCGTGTTGC AGCCGCTGCT GCTGGAAAAG GAGAAAATTT TCCATCTGCC GGGCAGTGAG
TTATTGCTGG TATTGACGGG ACCGGAGACG GAAGCCCGCC TGCAATATAT GCTCAATGTG
CTTAATAACC GCAAAATTTA CTGGAACAAT ACCGGTCTGG ACATGGAATA CGGCGCATCG
TGGGGAACAT TCGATGGTCG CCAGGAAACC TTGCAACCGC TGTTGGGGCA ATTAAGCTGG
CTGGCGGAGC AATCCTGTTC GCACCGTCGG GTGCTTGCAC TGACCCAGAG TATTGAAGCC
GCTTCCGGGC AGACGACGGA ACGGGTGCTG CGGTTGCAGA AAATCCGTCA GGCGCTGGAG
CGCGGCGCGC TGGTTTTGTA TGCGCAACCC ATTCGCGACT CGCAGGGAAA AGGGTATGAC
GAGATTCTGA CGCGGCTTCG GTGCGACGAC GGTATCATGA TGCCCAATCA GTTCATTCCG
CTTATCGCCC AGTTTAACCT GAGCGTACGG TTTGATATGC AGGTGATGGA AGCGCTCCTG
CAATGGTTGT CCGCGCATCC TTCGGCGGAG CAGGGGGCGC GTTTCTCGGT TAATTTGATG
CCGCTGACGC TGCTGCAAAA AGAGACGGCG TCGCGCATTA TGCAGCTTTT TAAACGCTAT
GGCGTCCCGC CTGCTTCGGT CATCATCGAA ATTACTGAAG AACAGGCCTT CTCTCATTCC
GAAATCAGTA TGCACAATAT CAACCAGCTG CGTAAGTTTG GCCTAAAAAT CGCCATTGAT
GATTTCGGCA CCGGCTATGC AAACTATGAA CGGCTAAAAC GCCTCAAGGC GGACATCATT
AAAATCGACG GTTGTTTCGT AAAAGATATT CTGACGGACT CCCTGGATGC GATGATCGTG
AAATCCATCA CTGATTTAGC GAAAGCGAAA TCGTTGAGCG TCGTGGCTGA GTTTGTTGAA
ACGCCTGCGC AGCGCGATCT GCTATTGCAG CTTGGCGTAC ACAGTTTGCA GGGATATCTG
ATTGGCCGCC CGCGCCCGTT AGGTAAATAA
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| Protein sequence | MLDKCNVLKN IKIFLLAFCL TVPAILLSRL ISPRATIDSS YIFLAWLPLC VMFSVLFLFG
RRGVAPMVGG MMLTNEWNFH LPLPQAMVLL FCQTFPVLLV CAIVRWQLGA RWRYGIPNQG
IWLRVFWLGL MTPFGIKISM HLAGHYLAFP VTISTFFGTG TAIFSIVDLL SLISAALIFT
LFFYYPLRMI VSPHYIRIFW RRDVAPYLAK EKRLFTLLWF ATLATLLAVL CTPFETKYIA
GYLVPVLFIG FTIGVGKISY PLLNFSWALT ALFLLSYNRN FLQGVGSEYS LAFILSVLIS
FSICLLYMAR INQRSEWLNR QWHSQALTDP LTQLPNLRAL EQFLLQDAGQ SVCYLRMENL
EFLSRHYGMQ MRVHCEREVF RVLQPLLLEK EKIFHLPGSE LLLVLTGPET EARLQYMLNV
LNNRKIYWNN TGLDMEYGAS WGTFDGRQET LQPLLGQLSW LAEQSCSHRR VLALTQSIEA
ASGQTTERVL RLQKIRQALE RGALVLYAQP IRDSQGKGYD EILTRLRCDD GIMMPNQFIP
LIAQFNLSVR FDMQVMEALL QWLSAHPSAE QGARFSVNLM PLTLLQKETA SRIMQLFKRY
GVPPASVIIE ITEEQAFSHS EISMHNINQL RKFGLKIAID DFGTGYANYE RLKRLKADII
KIDGCFVKDI LTDSLDAMIV KSITDLAKAK SLSVVAEFVE TPAQRDLLLQ LGVHSLQGYL
IGRPRPLGK
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