Gene SeD_A2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2753 
Symbol 
ID6874127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2632196 
End bp2633134 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content47% 
IMG OID642785812 
Productouter membrane protease 
Protein accessionYP_002216468 
Protein GI198245159 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4571] Outer membrane protease 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.78481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC ATGCTATTGC AGTAATGATG ATCGCCGTAT TTTCTGAGTC GGTTTATGCG 
GAGTCTACCT TATTTATTCC GGACGTCTCT CCTGATAGCG TCACGACATC CCTTTCTGTG
GGGGTGTTAA ATGGTAAATC CAGGGAGCTG GTTTATGATA CCGACACCGG GCGGAAGCTG
AGTCAACTGG ACTGGAAAAT AAAAAATGTC GCCACGTTGC AGGGGGATTT ATCATGGGAA
CCCTATTCGT TCATGACGCT GGACGCCCGC GGCTGGACGT CTTTGGCGTC GGGATCGGGT
CATATGGTTG ACCATGACTG GATGAGCAGT GAGCAGCCTG GCTGGACCGA TCGTTCAATT
CATCCGGACA CCAGCGCCAA CTATGCTAAT GAATACGATT TGAATGTGAA AGGTTGGTTA
TTGCAGGGCG ATAACTACAA GGCGGGCGTG ACAGCGGGCT ATCAGGAAAC CCGTTTTAGC
TGGACGGCAA GAGGCGGGTC TTATATTTAT GATAATGGTC GGTATATTGG TAACTTTCCT
CATGGCGTGC GCGGTATAGG TTATAGCCAG CGTTTCGAAA TGCCCTATAT CGGGCTGGCG
GGTGATTATC GTATTAATGA CTTTGAGTGT AATGTACTGT TTAAATACAG CGACTGGGTA
AATGCGCATG ATAATGACGA ACACTACATG CGCAAACTTA CCTTCCGTGA AAAAACGGAA
AATTCACGAT ATTATGGCGC GTCTATTGAC GCCGGATATT ATATTACCAG TAATGCAAAA
ATCTTTGCTG AGTTCGCTTA CAGTAAATAT GAAGAAGGTA AGGGCGGTAC GCAAATCATA
GATAAAACCA GCGGTGATAC GGCGTATTTT GGTGGCGATG CCGCAGGTAT AGCTAATAAT
AACTATACGG TTACCGCGGG GTTGCAGTAC CGCTTCTAG
 
Protein sequence
MKKHAIAVMM IAVFSESVYA ESTLFIPDVS PDSVTTSLSV GVLNGKSREL VYDTDTGRKL 
SQLDWKIKNV ATLQGDLSWE PYSFMTLDAR GWTSLASGSG HMVDHDWMSS EQPGWTDRSI
HPDTSANYAN EYDLNVKGWL LQGDNYKAGV TAGYQETRFS WTARGGSYIY DNGRYIGNFP
HGVRGIGYSQ RFEMPYIGLA GDYRINDFEC NVLFKYSDWV NAHDNDEHYM RKLTFREKTE
NSRYYGASID AGYYITSNAK IFAEFAYSKY EEGKGGTQII DKTSGDTAYF GGDAAGIANN
NYTVTAGLQY RF