Gene SeD_A2747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2747 
Symbol 
ID6873107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2625972 
End bp2626913 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content50% 
IMG OID642785807 
Productinner membrane protein YfdC 
Protein accessionYP_002216464 
Protein GI198244565 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCC TTAACGACGA TAAAATTAAC CGGCAAAGCA GTGACCTGGA AGTTGAAAGC 
GAAGAAAAAC AAAGCGGTAA AGAGATTGAA GTGGATGAAG ATCGTCTTCC TTCCCGCGCC
ATGGCGATTC ATGAACATAT TCGCCAGGAT GGTGAAAAAG AGATGGAACG CGATGCGATG
GCTTTGCTCT GGTCAGCCAT TGCCGCAGGA CTTTCTATGG GGGCATCACT CCTGGCGAAA
GGGATTTTCC ACGTGCAGCT TGAAGGCGTT CCCGGCGGCT TTTTACTGGA AAATCTCGGC
TATACCTTTG GTTTTATCAT TGTCATCATG GCCCGCCAGC AATTATTTAC TGAAAATACC
GTTACCGCCG TGTTGCCGGT AATGCAAAAT CCCACTCTGA GTAACGTTGG CCTGCTGATG
CGCTTGTGGG GCGTAGTCTT ATTGGGCAAC CTTATTGGCA CCGGGGTTGC GGCGTGGGCA
TTTGAATATA TGCCTATATT TGATGAAGAG ACCCGCGACG CCTTTGTCAA AATTGGTATG
GAGGTCATGA AAAATAGCCC AACGGAGATG TTTGCCAACG CGATTATCTC TGGCTGGATT
ATCGCCACAA TGGTATGGAT GTTTCCTGCA GCAGGCGGGG CAAAGATTGT GGTCATTATT
TTGATGACCT GGCTTATCGC GCTGGGCGAT ACCACCCATA TTGTCGTCGG TTCCGTTGAA
ATTTTGTATT TGGTTTTCAA CGGCACGCTG CCCTGGAGCG ACTTTCTCTG GCCCTTCGCC
CTTCCCACAC TTGCCGGAAA TATCTGCGGC GGCACTTTTA TTTTCGCATT GATGAGCCAC
GCGCAGATCC GCAACGATAT GAGCAATAAG CGTAAGGAAG AAGCGAGGCT ACGCGGCGAG
CGCCTGGAAC GGGAGCGGAA AAAAGCGGAA AAACAGCGCT GA
 
Protein sequence
MDSLNDDKIN RQSSDLEVES EEKQSGKEIE VDEDRLPSRA MAIHEHIRQD GEKEMERDAM 
ALLWSAIAAG LSMGASLLAK GIFHVQLEGV PGGFLLENLG YTFGFIIVIM ARQQLFTENT
VTAVLPVMQN PTLSNVGLLM RLWGVVLLGN LIGTGVAAWA FEYMPIFDEE TRDAFVKIGM
EVMKNSPTEM FANAIISGWI IATMVWMFPA AGGAKIVVII LMTWLIALGD TTHIVVGSVE
ILYLVFNGTL PWSDFLWPFA LPTLAGNICG GTFIFALMSH AQIRNDMSNK RKEEARLRGE
RLERERKKAE KQR