Gene SeD_A2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2746 
Symbol 
ID6875696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2624928 
End bp2625683 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID642785806 
Productlipoprotein, VacJ family 
Protein accessionYP_002216463 
Protein GI198243765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0633065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTC GCCTGTCGGC GCTGGCGCTG GGAACCACAC TGCTGGTCGG GTGTGCGAGT 
TCCGGTACAG AACAGCAGGG GCGTTCAGAC CCATTTGAAG GGTTTAACCG CACCATGTAC 
AACTTCAACT TTAATGTGCT GGACCCGTAT GTTGTTCGGC CGGTCGCGGT CGCCTGGCGT 
GATTATGTTC CACAGCCTGC GCGTAACGGT TTAAGTAATT TCACCGGCAA CCTCGAAGAA 
CCGGCGATCA TGGTGAACTA TTTCCTGCAG GGCGATCCTT ATCAGGGTAT GGTGCATTTC 
ACCCGTTTCT TCCTGAACAC CTTATTAGGG ATGGGCGGAT TTATTGACGT CGCGGGAATG 
GCGAATCCTA AGCTGCAGCG CGTTGAACCG CATCGCTTTG GCAGTACGCT GGGCCATTAT 
GGCGTGGGGT ATGGGCCTTA TATGCAACTT CCGTTCTACG GCAGCTTCAC GCTGCGTGAA 
GATGGCGGGG ATATGGCGGA TACCTTGTAT CCGGTGCTCT CGTGGTTGAC CTGGCCAATG 
TCCATAGGAA AATGGACTAT CGAAGGGATA GAAACCCGCG CGCAGTTGCT GGACTCCGAT 
GGTTTGCTGC GCCAGTCTTC CGATCCTTAT ATTATGGTGC GTGAGGCGTA CTTCCAGCGT 
CATGACTTTA TCGCCAATGG CGGAAAACTC AAGCCGCAGG AAAACCCGAA CGCGCAGGCG 
ATTCAGGACG AACTCAAAGA GATCGACTCG GAATAA
 
Protein sequence
MKLRLSALAL GTTLLVGCAS SGTEQQGRSD PFEGFNRTMY NFNFNVLDPY VVRPVAVAWR 
DYVPQPARNG LSNFTGNLEE PAIMVNYFLQ GDPYQGMVHF TRFFLNTLLG MGGFIDVAGM 
ANPKLQRVEP HRFGSTLGHY GVGYGPYMQL PFYGSFTLRE DGGDMADTLY PVLSWLTWPM 
SIGKWTIEGI ETRAQLLDSD GLLRQSSDPY IMVREAYFQR HDFIANGGKL KPQENPNAQA 
IQDELKEIDS E