Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2745 |
Symbol | |
ID | 6874911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2623560 |
End bp | 2624867 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642785805 |
Product | long-chain fatty acid outer membrane transporter |
Protein accession | YP_002216462 |
Protein GI | 198246206 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00852795 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA AAACCCTGTT TACAAAGTCT GCTCTCGCAG TCGCAGTGGC AATCATCTCC ACCCAGGCCT GGTCTGCAGG CTTTCAGTTA AACGAATTTT CTTCCTCTGG CCTTGGCCGG GCCTATTCGG GTGAAGGCGC AATCGCAGAT GATGCGGGTA ACGTTAGCCG CAACCCGGCG TTAATTACCA TGTTTGACCG CCCGACGTTT TCAGCGGGCG CGGTTTATAT TGATCCTGAT GTTAATATTA GCGGGACATC GCCATCTCGT CGGACGTTAG ATGCGGATAA CATCGCGCCG ACGGCCTGGG TGCCGAACGT CCATTTTGTC GCCCCGATTA ACGATCAGTT TGGCTGGGGG GCTTCTATTA CCTCTAACTA TGGTCTGGCG ACAGAGTTTA ACGACACATA CGCCGGCGGC TCGGTTGGCG GTACGACCGA TCTTGAAACC ATGAACCTGA ATTTAAGCGG CGCTTATCGC TTAAATGAGG CCTGGAGCTT CGGCCTTGGC TTTGATGCGG TATACGCGCG TGCGAAAATC GAACGTTTTG CGGGCGATTT AGGCCAGTTG GTCGCGGCAC AGAATCCGGC GCTGGCGCCG GTCGCGGGTC AGATTCCCAG CGACACCAAG ATTGCCCACC TGAACGGTAA TCAGTGGGGC TTTGGCTGGA ATGCCGGTAT CCTTTATGAA CTGGATAAAA ATAACCGCTA CGCGCTGACC TACCGCTCGG AAGTCAAAAT TGACTTTAAA GGCAACTACA GCAGCGATCT TCCCATCGCT ATAAACCGAT TTAACCTGCC TATCCCAACG GCAACCGGCG GCGCGACGCA GTCAGGCTAC CTGACGCTGA ATCTGCCGGA AATGTGGGAA GTGTCCGGTT ATAACCGTGT GGCGCCACAG TGGGCCATCC ACTATAGCCT GGCCTATACC AGCTGGAGCC AGTTCCAGGA ATTGAAGGCA AAATCGACCG CCGGCGATAC GCTCTTTGAG AAGCATGAAG GCTTTAAAGA CGCTTATCGC ATTGCGTTGG GTACCACCTA TTACTACGAT GACAACTGGA CGTTCCGTAC CGGTATCGCC TTCGATGACA GCCCGGTACC AGCGCAAAAC CGTTCTATCT CTATTCCGGA CCAGGACCGT TTCTGGCTGA GCGCCGGTAC GACTTACGCC TTTAATAAAG ATGCGTCTGT CGACGTTGGC GTCTCTTATA TGCATGGTCA GAGCGTGAAA ATTAATGAAG GCCCTTATCA GTTTGAATCT GAAGGGAAAG CCTGGCTGTT CGGTACTAAC TTTAACTACG CGTTCTAA
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Protein sequence | MSQKTLFTKS ALAVAVAIIS TQAWSAGFQL NEFSSSGLGR AYSGEGAIAD DAGNVSRNPA LITMFDRPTF SAGAVYIDPD VNISGTSPSR RTLDADNIAP TAWVPNVHFV APINDQFGWG ASITSNYGLA TEFNDTYAGG SVGGTTDLET MNLNLSGAYR LNEAWSFGLG FDAVYARAKI ERFAGDLGQL VAAQNPALAP VAGQIPSDTK IAHLNGNQWG FGWNAGILYE LDKNNRYALT YRSEVKIDFK GNYSSDLPIA INRFNLPIPT ATGGATQSGY LTLNLPEMWE VSGYNRVAPQ WAIHYSLAYT SWSQFQELKA KSTAGDTLFE KHEGFKDAYR IALGTTYYYD DNWTFRTGIA FDDSPVPAQN RSISIPDQDR FWLSAGTTYA FNKDASVDVG VSYMHGQSVK INEGPYQFES EGKAWLFGTN FNYAF
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