Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2743 |
Symbol | fadI |
ID | 6874170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2621415 |
End bp | 2622725 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642785804 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_002216461 |
Protein GI | 198244949 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.467701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCAGG CTTTACCGTT GGTCACCCGT CAGGGCGATC GCATTGCTAT TGTCAGTGGG TTACGAACCC CCTTCGCTCG TCAGGCCACT GCATTTCATG GTATTCCCGC TGTTGATCTC GGCAAGATGG TGGTAGGCGA GCTGCTGGCG CGCAGTGAAA TTCCAGCCGA TGCCATTGAG CAACTGGTTT TTGGTCAGGT AGTACAAATG CCGGAAGCGC CCAACATTGC GCGCGAAATT GTGCTGGGTA CGGGGATGAA TGTTCATACC GATGCCTATA GCGTAAGCCG CGCCTGCGCC ACCAGTTTTC AGGCGGTAGC GAATGTGGCG GAAAGCCTGA TGGCCGGCAC GATACGCGCG GGTATCGCTG GCGGCGCAGA TTCGTCGTCG GTACTGCCAA TAGGCGTGAG TAAAGCCCTG GCGCGGGTAC TGGTTGATGT CAATAAAGCC CGGACGACCC GCCAACGGCT GACGCTTTTT TCTCGTCTGC GCTTACGCGA CCTGCTGCCC GTGCCTCCCG CCGTTGCTGA GTATTCCACC GGTCTGCGCA TGGGCGATAC CGCCGAACAG ATGGCGAAAA CGTATGGTAT TACGCGTGAA CAGCAGGACG CACTGGCGCA TCGTTCACAT CAGCGCGCCG CGCAGGCATG GGCGGAGGGT AAACTGGCGG AAGAAGTGAT GACGACCTAT GTGCCGCCGT ATAAAAACCC CTTTGCAGAA GACAACAACA TTCGCGGCGC CTCCACGCTG GCGGACTACG CTAAACTGCG TCCCGCTTTT GACCGAAAAC ATGGCTCCGT AACCGCCGCC AACAGTACAC CGCTGACCGA CGGCGCTGCC GCCGTTATTA TGATGACCGA ATCCCGCGCT AAAGAGCTGG GGCTGCGCCC GCTTGGTTAT CTGCGCAGCT ACGCCTTTAC CGCTATTGAT GTCTGGCAGG ACATGCTATT GGGGCCGGCC TGGTCAACGC CGCTGGCGCT GGAGCGGGCC GGGTTGACGA TGGCCGATCT GACGCTTTTT GACATGCATG AAGCGTTTGC CGCCCAGACT CTGGCGAACT TACAACTGCT GGGCAGCGAA CGATTTGCCC GTGAGGTGCT TGGTCGTGCG CAGGCGACAG GGGAGGTGGA TGACGCTAAA TTCAACGTGC TCGGCGGCTC AATCGCCTAC GGGCATCCTT TTGCCGCAAC GGGCGCGCGG ATGATAACCC AAACGTTGCA TGAATTACGG CGTCGGGGCG GAGGTTTTGG CCTGGTCACG GCCTGCGCGG CTGGCGGTCT TGGCGCGGCG ATGGTTCTGG AGGCGGAATA A
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Protein sequence | MRQALPLVTR QGDRIAIVSG LRTPFARQAT AFHGIPAVDL GKMVVGELLA RSEIPADAIE QLVFGQVVQM PEAPNIAREI VLGTGMNVHT DAYSVSRACA TSFQAVANVA ESLMAGTIRA GIAGGADSSS VLPIGVSKAL ARVLVDVNKA RTTRQRLTLF SRLRLRDLLP VPPAVAEYST GLRMGDTAEQ MAKTYGITRE QQDALAHRSH QRAAQAWAEG KLAEEVMTTY VPPYKNPFAE DNNIRGASTL ADYAKLRPAF DRKHGSVTAA NSTPLTDGAA AVIMMTESRA KELGLRPLGY LRSYAFTAID VWQDMLLGPA WSTPLALERA GLTMADLTLF DMHEAFAAQT LANLQLLGSE RFAREVLGRA QATGEVDDAK FNVLGGSIAY GHPFAATGAR MITQTLHELR RRGGGFGLVT ACAAGGLGAA MVLEAE
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