| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2711 |
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| Symbol | |
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| ID | 6875363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2592428 |
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| End bp | 2593825 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642785776 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002216433 |
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| Protein GI | 198242305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.757522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGACT CGATTATGCA GAATTACAAC CAGCTACGTG AGCAGGTAAT CAACGGCGAT
CGCCGTTTCC AGCACAAAGA CGGTCATTTG TGTTTTGAAG GGGTCGATCT GGACGCACTG
GCGCGCCAGT ACCCCACGCC GTTCTATGTG TTTTCTGAGC CGGAGATTAT TCGTAACATT
CATGAAATCC AGCAGGCATT TGCGGCGCAT AAAAATACCA AAACCTTCTT TGCGTCAAAA
ACCTGCTCGG TCATGGGGGT ATTGAAAGCC ATTCGTGACG CCGGAATTTG CGCGGAGGCA
AACTCACAAT ATGAGGTTCG CAAGTGTCTG GAGATAGGCT TTCGCGGAGA TCAGATCGTC
TTCAACGGCG TGGTGAAAAA GCCTGCCGAT CTGGAATATG CCATCGCTAA CGATCTGTAT
CTTATTAATG TTGATAGCCT GTATGAGCTG GAACATATTG ATGCCATCTC TCGCAAGCTG
AAGAAAGTCG CCAATGTTTG CGTCCGCGTA GAACCGAATG TTCCCTCGGC GACGCATGCG
GAACTGGTTA CCGCTTTCCA TGCGAAGTCG GGTCTCGACC TGGAACAGGC GGAAGAAACC
TGCCGCCGCA TTCTGGCGAT GCCTTATGTG CATTTACGCG GCTTGCATAT GCATGTAGGC
GATCAGGTGC CGGAGTCAGA GCCTTTCGCA AAAGCGACTA AAGTGCTGGT GGATGAATCC
CGTCGTCTGG AAGAGGTGCT CGGTATTAAA TTTGATTTGA TTAACGTGGG CGGCGGAATT
CCGGTTCCCT ATAAATATGA CGACGAGAAT GGCGACCCGT TAAAAGATAA TATGTATGCC
GGTATTACCG CCCAGGATTT TGCCGATGCG GTCATTCGCG AAGTGCATAA ATGGCGTACC
GATGTGGAAA TATGTATTGA ACCGGGACGT AAAGTGACCG GGTCGGCGGC GGTTTTACTG
ACGGAAGTCT CCTGCGAAAA ACGTAAAACA AATTACGATC TTAACGGCAA TGTGGAATGC
CACGTTGAAT GGAAATTTGT CGACGCTGGT TACAGCGTAC TCTCTGACAG CCAGCATTTT
GACTGGTTCT TTTATGTCTA TAACGCCTCT CGCATGACGG CAGCGCACGA CGCCTGGGTA
AAATTAGCCG GGCCGCTGTG TGATGGCGGA GATTATTTCC ACATGGGGGT GAAAGGCGAA
GAGTTTTTAC TGCCGAAGGA GACTCATGTT GGCGATATTG TCGCGTTTCT TGATGCCGGG
GCATACACCA TTGAAAGTCA AACCGTTTAT AACAACCGTC CGCGCACGGG GGTGGTGATG
ATCGATAAAA ATGGTGAGAC GCGTCTGATT CGTCGGGAAG ACAGTTACGA AGATATGGTC
AAGTACGACA TTTATTAA
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| Protein sequence | MTDSIMQNYN QLREQVINGD RRFQHKDGHL CFEGVDLDAL ARQYPTPFYV FSEPEIIRNI
HEIQQAFAAH KNTKTFFASK TCSVMGVLKA IRDAGICAEA NSQYEVRKCL EIGFRGDQIV
FNGVVKKPAD LEYAIANDLY LINVDSLYEL EHIDAISRKL KKVANVCVRV EPNVPSATHA
ELVTAFHAKS GLDLEQAEET CRRILAMPYV HLRGLHMHVG DQVPESEPFA KATKVLVDES
RRLEEVLGIK FDLINVGGGI PVPYKYDDEN GDPLKDNMYA GITAQDFADA VIREVHKWRT
DVEICIEPGR KVTGSAAVLL TEVSCEKRKT NYDLNGNVEC HVEWKFVDAG YSVLSDSQHF
DWFFYVYNAS RMTAAHDAWV KLAGPLCDGG DYFHMGVKGE EFLLPKETHV GDIVAFLDAG
AYTIESQTVY NNRPRTGVVM IDKNGETRLI RREDSYEDMV KYDIY
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