Gene SeD_A2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2708 
Symbol 
ID6875258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2588341 
End bp2589747 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content53% 
IMG OID642785773 
Productputative amino acid transporter 
Protein accessionYP_002216430 
Protein GI198245076 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0833] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0671509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCC TGCAACAATC TCCGCCAGCA GAGCCTGAAG GCGGTCTGCG GCGTAACCTG 
AAGAAGCGGC ACCTGCTGAT GATGTCGCTG GGCGGCACGA TTGGCACCGG CTTATTTATC
GGCATTGCCG AACCGTTAAG CAGCGTCGGG CCGGCGGGAA CCTTACTGGC CTATCTGTTT
GCCGGAACCA TTATGCTGGC GACGATGATG TGTCTTGGCG AATTATCATG CGCTTTTCCT
CACTCCGGTT CATTTCAACA TTACGCGCTG ATGTTTATGC CGTCACCTTG CTGGAGCTAT
ACCATTGGCT GGCTTTACTG GTTTAGCTGG GTCTTTTCCT TGGCAGCCGA CCTCACTGCC
GCAGGGTTTA TTGCTCACCA GTTTTTCCCC GCGGTTCCGG TATATATGTT CTGCCTGGCG
ATTCTGCTCA TCCTGACGGC TATCAATCTC ACCTCCGCAA AAAGTTTTGG CGAATGCGAA
TACTGGCTTT CGGCCATTAA GGTCTTCGCG ATCGTGCTGT TTATCTGCGC GGGCGGGGTC
ATGATCTACT CGCTAATGGG CCATAGTGAC TGGCACCCGA CGTTAAAAAT AGACGGAATG
TGGTTTCCCC ACGGTTGGGA GCAAATTGTG GTCTGTATGA CGATCGTGAT TTACTCCTTC
CAGGGGGTGG AACTGGTCGG AAATGCGGCA GGGGAGACCG AATCGCCGCA CATTATTTTA
CCGAAAGTGA TCCTGGGGAT CGGTCTCAGA ATCATTTTGT TTTACGGCCT GGCGATTGCG
GTGCTGGCGC TGGTCTATCC GCATGAACTG ACGCCAAATG GACAAAGTCC CTTTGTATGG
GTATTCTCCC ACGCGGGCAT TCCGGGGGCG GATACGCTGA TGACGCTGGT GATCTTTTCC
GCCGCGGTTT CTGCCGCTAA CTCGGCCATT TACGCCAGTT CGCGTATGCT GTGGTCTATG
GCGGGCGATC GCTTTGCGCC AGCCTGCTTT GGTAAAACGA ACGGCGGCGG CGTGCCGGTG
TATGCTATTT TAATCACGGC CTTGTTGGCG TTAGTGTCGT TGCTGACCCG CTATATTCCC
GCACAGCAAT TTTATTTATA TCTGATCGCC AGTACCGGGC AGGTGGGTTG CCTGGCATGG
ATAACCATCG GATGGTGCCA GTATCGTTTC CGACAATCGG TGCGTAATGG AACGTACGCC
AGCGATTTGC TACGCTATCG ATCGCCGCTT TTCCCCTGGA CGGCCCGATT TGTCATTATC
ACCAATTTTG CCATTATGGT CGGCACCTGG TTTAGTGAGC AAGGGGTAGT GATAATGCTG
GTTGAGCTGG CTTTTATGAT AGGGATTCTT TTGTCATGGT ATCTCTTCAG ACCCACTTTG
AGCCGATTAC GTAACACAGT GGGATGA
 
Protein sequence
MDTLQQSPPA EPEGGLRRNL KKRHLLMMSL GGTIGTGLFI GIAEPLSSVG PAGTLLAYLF 
AGTIMLATMM CLGELSCAFP HSGSFQHYAL MFMPSPCWSY TIGWLYWFSW VFSLAADLTA
AGFIAHQFFP AVPVYMFCLA ILLILTAINL TSAKSFGECE YWLSAIKVFA IVLFICAGGV
MIYSLMGHSD WHPTLKIDGM WFPHGWEQIV VCMTIVIYSF QGVELVGNAA GETESPHIIL
PKVILGIGLR IILFYGLAIA VLALVYPHEL TPNGQSPFVW VFSHAGIPGA DTLMTLVIFS
AAVSAANSAI YASSRMLWSM AGDRFAPACF GKTNGGGVPV YAILITALLA LVSLLTRYIP
AQQFYLYLIA STGQVGCLAW ITIGWCQYRF RQSVRNGTYA SDLLRYRSPL FPWTARFVII
TNFAIMVGTW FSEQGVVIML VELAFMIGIL LSWYLFRPTL SRLRNTVG