| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2705 |
|---|
| Symbol | |
|---|
| ID | 6872520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2586674 |
|---|
| End bp | 2587456 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642785770 |
|---|
| Product | lysine-arginine-ornithine-binding periplasmic protein |
|---|
| Protein accession | YP_002216427 |
|---|
| Protein GI | 198242827 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.588251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA CCGTTCTCGC TTTGTCTTTG CTGATAGGTC TGGGCGCGAC GGCGGCCAGT
TACGCCGCGC TCCCGCAAAC GGTTCGTATT GGAACAGATA CCACCTACGC GCCTTTCTCA
TCAAAAGATG CCAAAGGCGA GTTTATTGGC TTTGATATCG ATCTCGGTAA TGAAATGTGT
AAGCGTATGC AGGTGAAATG TACCTGGGTC GCCAGCGACT TTGATGCGCT TATTCCCTCA
CTAAAAGCGA AAAAAATTGA TGCCATTATT TCATCGCTCT CTATCACCGA TAAACGCCAG
CAAGAAATTG CGTTTTCCGA CAAACTTTAC GCGGCGGATT CACGTCTGAT TGCGGCAAAA
GGGTCTCCCA TTCAGCCGAC GCTGGAATCG CTGAAAGGCA AGCATGTCGG CGTGCTGCAA
GGGTCCACGC AAGAGGCTTA CGCCAATGAT AACTGGCGCA CTAAAGGTGT GGATGTGGTG
GCTTATGCCA ACCAGGATCT TATCTATTCC GATTTAACCG CCGGTCGCCT GGATGCTGCA
TTGCAGGATG AAGTCGCCGC CAGCGAAGGT TTCCTGAAGC AGCCAGCGGG CAAGGAGTAT
GCGTTTGCCG GTCCTTCCGT GAAGGATAAA AAATATTTTG GCGACGGGAC GGGGGTTGGG
CTGCGCAAAG ACGATACCGA GCTAAAAGCC GCGTTTGATA AAGCGCTGAT CGAACTGCGC
CAGGACGGAA CTTACGACAA AATGGCCAAA AAGTACTTCG ATTTTAATGT CTACGGCGAT
TGA
|
|---|
| Protein sequence | MKKTVLALSL LIGLGATAAS YAALPQTVRI GTDTTYAPFS SKDAKGEFIG FDIDLGNEMC
KRMQVKCTWV ASDFDALIPS LKAKKIDAII SSLSITDKRQ QEIAFSDKLY AADSRLIAAK
GSPIQPTLES LKGKHVGVLQ GSTQEAYAND NWRTKGVDVV AYANQDLIYS DLTAGRLDAA
LQDEVAASEG FLKQPAGKEY AFAGPSVKDK KYFGDGTGVG LRKDDTELKA AFDKALIELR
QDGTYDKMAK KYFDFNVYGD
|
|---|
| |