| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2704 |
|---|
| Symbol | |
|---|
| ID | 6873203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2585654 |
|---|
| End bp | 2586436 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642785769 |
|---|
| Product | putative lysine-arginine-ornithine-binding periplasmic protein |
|---|
| Protein accession | YP_002216426 |
|---|
| Protein GI | 198243211 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGGCGTTATC CCTTTCTCTG GTGCTGGCAT TTTCCAGCGC TACCGCAGCA
TTTGCCGCTA TTCCACAAAA GATTCGTATC GGTACCGATC CTACATACGC ACCGTTTGAA
TCCAAAAATG CACAAGGTGA ATTGGTCGGC TTTGATATCG ATCTGGCCAA AGAGCTGTGC
AAACGTATCA ACACACAGTG TACGTTCGTG GAAAACCCGC TGGATGCGCT GATTCCGTCT
TTAAAAGCGA AGAAAATTGA TGCCATCATG TCCTCGCTGT CCATCACTGA AAAGCGCCAG
CAGGAAATCG CGTTTACCGA CAAGCTTTAC GCCGCTGATT CCCGTCTGGT GGTGGCGAAG
AACTCTGATA TTCAGCCGAC CGTCGCGTCG CTGAAAGGCA AGCGCGTCGG CGTGCTACAG
GGGACGACGC AGGAGACCTT CGGCAATGAG CACTGGGCGC CGAAAGGGAT TGAGATCGTC
TCTTACCAGG GGCAGGACAA CATTTATTCC GATCTGACGG CTGGTCGTAT TGATGCAGCG
TTCCAGGACG AGGTCGCGGC CAGCGAAGGT TTCCTTAAAC AGCCCGTCGG AAAAGACTAT
AAATTCGGCG GCCCGGCGGT GAAAGATGAG AAGTTATTCG GCGTAGGAAC CGGTATGGGG
CTGCGCAAAG AGGATAACGA GCTGCGCGAA GCGCTGAACA AAGCCTTTGC TGAAATGCGT
GCTGACGGTA CTTACGAAAA GCTGGCGAAA AAGTACTTTG ATTTTGATGT TTATGGCGGT
TAA
|
|---|
| Protein sequence | MKKLALSLSL VLAFSSATAA FAAIPQKIRI GTDPTYAPFE SKNAQGELVG FDIDLAKELC
KRINTQCTFV ENPLDALIPS LKAKKIDAIM SSLSITEKRQ QEIAFTDKLY AADSRLVVAK
NSDIQPTVAS LKGKRVGVLQ GTTQETFGNE HWAPKGIEIV SYQGQDNIYS DLTAGRIDAA
FQDEVAASEG FLKQPVGKDY KFGGPAVKDE KLFGVGTGMG LRKEDNELRE ALNKAFAEMR
ADGTYEKLAK KYFDFDVYGG
|
|---|
| |