Gene SeD_A2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2688 
Symbol 
ID6873310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2572743 
End bp2574263 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content55% 
IMG OID642785753 
Producthypothetical protein 
Protein accessionYP_002216410 
Protein GI198243414 
COG category[S] Function unknown 
COG ID[COG1288] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.831014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCG TTACAGAATC AAAAACAGCC AGAAAATGGG CAATGCCCGA TACGCTGGTC 
ATCATCTTTT TTGTCGCCAT TTTAACCAGT ATCGCCACCT GGGTCGTACC CGTTGGGATG
TTTGATAGCC AGGAAGTGCA GTATCAGGTC GATGGTCAGA CAAAAACCCG CAAAGTCGTC
GACCCGCACT CTTTTCGCAT TGTGACCAAT GAGGCCGGGG AAGCGCAGTA TCATCGCGTA
CAATTTTTCA CTACCGGCGA TGAAAGACCA GGGCTGATGA ATTTTCCGTT TGAAGGGTTA
ACATCCGGAT CGAAATTCGG CACTGCCGTC GGCATCATTA TGTTTATGTT GGTGATTGGC
GGCGCATTCG GCATCGTGAT GCGTACCGGC ACCGTGGATA ACGGCATTCT GGCGCTTATT
CGCCACACGC GGGGCAACGA AGTCCTGTTT ATTCCGGTGC TATTTGTCCT CTTTTCGTTA
GGGGGCGCCG TATTTGGCAT GGGCGAAGAG GCGGTCGCCT TTGCAATTAT CATAGCCCCG
CTGATGGTCA GGCTGGGCTA TGACAGCATT ACCACCGTCC TGGTGACCTA TATCGCCACC
CAAATTGGCT TTGCCAGTTC GTGGATGAAC CCTTTCTGCG TAGTCGTCGC CCAGGGGATT
GCCGGCGTGC CGGTACTTTC CGGCTCCGGG CTGCGTATTG CGGTCTGGAT TGTCGCCACG
CTGATTGGGC TGGTTTTTAC ACTGGTCTAC GCCTCACGCG TGAAAAAGAA TCCGCTGCTG
TCCCGCGTCC ACGAATCCGA TCGCTATTTC CGCGAACAGC AGGATGAAGT CGTCCAGCGC
CCTTTCACCT TCGGTGACTG GCTGGTACTG CTGGTCCTGA CCGGCGTAAT GATTTGGGTC
GTCTGGGGCG TGATTGTCCA CGCCTGGTTT ATTCCGGAGA TCGCCAGCCA GTTTTTCACC
ATGGGCGTGG TGATCGGCCT CATCGGCGTT ATCTTCCGCC TCAACGGTAT GACGGTCAAC
GTGATGGCGT CCTCATTCAC CGAAGGGGCG AGGATGATGA TCGCGCCCGC CTTGCTGGTG
GGTTTTGCCA AAGGCATTCT GCTGCTGGTC GGCAACGGCG AAGCCGGGGA ACCCAGCGTG
CTCAATACGC TGCTTAACAG TATCGCGCAT GGCATCAGCG GGCTTAATAA TGCTATCGCC
GCCTGGTTTA TGCTGCTCTT CCAGGCGGTA TTTAATTTCT TTGTCACGTC CGGTTCGGGT
CAGGCGGCGT TAACCATGCC ATTACTGGAG CCGCTCGGCG ATCTGGTCGG TGTTAACCGT
CAGGTGACTG TTCTGGCCTT CCAGTTTGGC GATGGCTTCA GCCATATTAT CTATCCGACA
TCAGCCTCGC TGATGGCCAC GCTGGGCGTG TGCCGGGTCG ATTTTCGCAA CTGGCTGAAA
GTGGGAGCGT CGCTGCTGGG ACTACTGTTT ATTATGTCCA GCGTGGTCGT CATTGGCGCG
CAGATGATGG GATATCATTA A
 
Protein sequence
MSVVTESKTA RKWAMPDTLV IIFFVAILTS IATWVVPVGM FDSQEVQYQV DGQTKTRKVV 
DPHSFRIVTN EAGEAQYHRV QFFTTGDERP GLMNFPFEGL TSGSKFGTAV GIIMFMLVIG
GAFGIVMRTG TVDNGILALI RHTRGNEVLF IPVLFVLFSL GGAVFGMGEE AVAFAIIIAP
LMVRLGYDSI TTVLVTYIAT QIGFASSWMN PFCVVVAQGI AGVPVLSGSG LRIAVWIVAT
LIGLVFTLVY ASRVKKNPLL SRVHESDRYF REQQDEVVQR PFTFGDWLVL LVLTGVMIWV
VWGVIVHAWF IPEIASQFFT MGVVIGLIGV IFRLNGMTVN VMASSFTEGA RMMIAPALLV
GFAKGILLLV GNGEAGEPSV LNTLLNSIAH GISGLNNAIA AWFMLLFQAV FNFFVTSGSG
QAALTMPLLE PLGDLVGVNR QVTVLAFQFG DGFSHIIYPT SASLMATLGV CRVDFRNWLK
VGASLLGLLF IMSSVVVIGA QMMGYH