Gene SeD_A2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2680 
Symbol 
ID6872345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2564466 
End bp2565065 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content50% 
IMG OID642785745 
Producthypothetical protein 
Protein accessionYP_002216402 
Protein GI198243725 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0592641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.884596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA GCCATTTTTT CGCCCATCTC TCCCGCATGA AGTTGATTAA CCGCTGGCCG 
CTGATGCGTA ACGTGCGTAC GGAAAACGTC TCCGAACATA GTCTGCAGGT GGCGATGGTC 
GCCCATGCGT TGGCGGCGAT AAAAAACCGT AAATTTGGCG GTCAGCTCAA TGCTGAACGC 
ATCGCGCTTC TGGCGATGTA TCATGATGCC TCGGAAGTAC TGACCGGCGA TCTGCCGACG 
CCGGTAAAAT ATTTTAATTC CCAGATAGCC CAGGAATATA AAGCGATCGA AAAAATCGCC 
CAGCAAAAGC TGGTTGATAT GGCGCCGGAT GAATTACGCG ATATTTTCGC ACCGCTTATT 
GATGAGAATG CCTGGAGCGA AGAAGAACAG GCAATCGTAA AACAGGCCGA TGCGCTTTGC 
GCCTACCTGA AATGCCTGGA GGAGCTCTCA GCGGGAAACA ATGAGTTTGG ACTGGCAAAA 
ACGCGGCTGG AAAAAACGCT GGAATTACGT CGCAGCCAGG AGATGGACTA TTTTATGGCG 
GTATTCGTAC CAAGTTTCCA TCTTTCTCTT GACGAGATAA GCCAGGATTC ACCGCTTTAG
 
Protein sequence
MKQSHFFAHL SRMKLINRWP LMRNVRTENV SEHSLQVAMV AHALAAIKNR KFGGQLNAER 
IALLAMYHDA SEVLTGDLPT PVKYFNSQIA QEYKAIEKIA QQKLVDMAPD ELRDIFAPLI 
DENAWSEEEQ AIVKQADALC AYLKCLEELS AGNNEFGLAK TRLEKTLELR RSQEMDYFMA 
VFVPSFHLSL DEISQDSPL