Gene SeD_A2672 details

Gene Information

• Locus tag: SeD_A2672
• Symbol: nuoC
• ID: 6875507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: -
• Start bp: 2557641
• End bp: 2559443
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642785739
• Product: bifunctional NADH:ubiquinone oxidoreductase subunit C/D
• Protein accession: YP_002216396
• Protein GI: 198244423
• COG category: [C] Energy production and conversion
• COG ID: [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7; [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C; [TIGR01962] NADH dehydrogenase I, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.48196
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 63
• Fosmid unclonability p-value: 0.871819
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTGAACA ATATGACCGA CTTAACCGCG CAAGACGCTG CATGGAGTAC CCGCGATCAT 
CTTGATGATC CGGTTATCGG CGAACTGCGC AACCGTTTTG GGCCGGATGC CTTTACCGTT 
CAGGCGACCC GCACCGGTAT CCCCGTTGTT TGGGTCAAGC GTGAACAACT ACTGGAGGTT 
GGCGATTTCT TAAAGAAACT GCCGAAACCT TACGTCATGC TGTTTGACTT ACACGGCATG 
GATGAACGCC TGCGTACGCA CCGTGACGGG TTACCCGCCG CGGATTTTTC CGTTTTCTAC 
CACCTGATTT CCATTGAGCG TAATCGCGAT ATCATGCTCA AGGTGGCGTT GTCTGAAAAC 
GACCTGCGCG TGCCGACCTT CACTAAACTT TTCCCTAACG CCAACTGGTA CGAGCGTGAG 
ACCTGGGAGA TGTTTGGTAT TGATATCGAA GGCCACCCGC ACCTGACGCG CATCATGATG 
CCGCAAACCT GGGAAGGCCA TCCGCTGCGT AAAGATTATC CGGCGCGCGC GACCGAATTC 
GACCCGTTTG AGCTGACCAA AGCCAAGCAG GATCTGGAAA TGGAAGCGCT GACCTTTAAG 
CCGGAAGACT GGGGGATGAA GCGCGGGACT GACAACGAGG ACTTTATGTT CCTCAACCTC 
GGCCCGAACC ACCCGTCTGC GCACGGTGCG TTTCGTATTA TCCTGCAACT TGACGGTGAA 
GAAATCGTCG ACTGCGTGCC GGATATCGGC TATCACCACC GCGGCGCCGA AAAAATGGGC 
GAGCGCCAGT CCTGGCATAG CTACATTCCC TATACCGACC GTATCGAATA CCTCGGTGGT 
TGCGTCAATG AAATGCCGTA CGTGCTGGCG GTAGAAAAGT TGGCAGGGAT CACCGTCCCG 
GATCGTGTGA ACGTCATCCG CGTGATGCTC TCCGAACTGT TCCGCATTAA CAGTCATCTG 
CTGTACATCT CGACCTTTAT TCAGGACGTC GGCGCGATGA CGCCGGTCTT CTTTGCCTTT 
ACCGACCGGC AGAAAATTTA TGACCTGGTG GAAGCCATTA CCGGTTTCCG TATGCACCCG 
GCCTGGTTCC GTATCGGCGG CGTCGCGCAC GACTTGCCGC GCGGTTGGGA TCGCCTGCTG 
CGAGAGTTCC TTGAGTGGAT GCCGAAGCGT CTGGATTCTT ACGAGAAAGC CGCGCTGCGT 
AACACTATTC TGAAAGGGCG TTCGCAGGGC GTTGCCGCTT ACGGCGCGAA AGAGGCGCTG 
GAGTGGGGCA CCACCGGCGC AGGGCTGCGC GCGACCGGGA TCGACTTCGA CGTACGTAAA 
TGGCGTCCAT ACTCTGGCTA CGAAAACTTT GACTTTGAAG TGCCGGTGGG CGGCGGCGTT 
TCCGACTGCT ATACCCGCGT GATGCTGAAA GTGGAAGAGC TGCGCCAGAG TCTGCGCATT 
CTTCAGCAGT GCCTCGATAA CATGCCGGAA GGGCCGTTCA AAGCGGATCA CCCGCTGACC 
ACGCCGCCGC CGAAAGAGCG CACGCTGCAA CATATCGAAA CCCTGATCAC CCACTTCCTG 
CAGGTCTCCT GGGGCCCGGT GATGCCGGCG CAGGAGTCCT TCCAGATGGT GGAAGCGACG 
AAGGGGATTA ACAGTTACTA CCTGACCAGC GACGGCAGCA CCATGAGCTA CCGTACCCGC 
GTGCGTACGC CGAGCTTTGC GCACCTGCAG CAGATTCCCT CGGCGATCCG CGGTAGCCTG 
GTCTCCGACC TGATTGTCTA TCTGGGTAGT ATCGATTTTG TTATGTCAGA TGTGGACCGC 
TAA 

 

Protein sequence

MVNNMTDLTA QDAAWSTRDH LDDPVIGELR NRFGPDAFTV QATRTGIPVV WVKREQLLEV 
GDFLKKLPKP YVMLFDLHGM DERLRTHRDG LPAADFSVFY HLISIERNRD IMLKVALSEN 
DLRVPTFTKL FPNANWYERE TWEMFGIDIE GHPHLTRIMM PQTWEGHPLR KDYPARATEF 
DPFELTKAKQ DLEMEALTFK PEDWGMKRGT DNEDFMFLNL GPNHPSAHGA FRIILQLDGE 
EIVDCVPDIG YHHRGAEKMG ERQSWHSYIP YTDRIEYLGG CVNEMPYVLA VEKLAGITVP 
DRVNVIRVML SELFRINSHL LYISTFIQDV GAMTPVFFAF TDRQKIYDLV EAITGFRMHP 
AWFRIGGVAH DLPRGWDRLL REFLEWMPKR LDSYEKAALR NTILKGRSQG VAAYGAKEAL 
EWGTTGAGLR ATGIDFDVRK WRPYSGYENF DFEVPVGGGV SDCYTRVMLK VEELRQSLRI 
LQQCLDNMPE GPFKADHPLT TPPPKERTLQ HIETLITHFL QVSWGPVMPA QESFQMVEAT 
KGINSYYLTS DGSTMSYRTR VRTPSFAHLQ QIPSAIRGSL VSDLIVYLGS IDFVMSDVDR