Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2654 |
Symbol | |
ID | 6872146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2538534 |
End bp | 2539829 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642785721 |
Product | menaquinone-specific isochorismate synthase |
Protein accession | YP_002216378 |
Protein GI | 198242217 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.253728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATTCTA TTACTACTGC GCTGGAAAAT CTGACGCGTC AGCTATCGCA AGAGATACCG GCGACGCCAG GGCTTTGCGT TTTCGATGCG CCTTTCCCTT TAAACGATGC CTTCGATGCA TTGAGCTGGC TGGCCAGCCA GTCATCCTTT CCGCAATTCT ACTGGCAACA GCGCAATGGC GACGAAGAAG CTGCCGTTCT CGGGGCCATC ACCGTATTTT CATCGCTCGA TCTGGCGCAA CGGTTTTTAC GTCAGCACGC GCAGCCTGAC CTGCGTATTT GGGGGCTGAA TGCGTTCGAG CCGAAAGAGG GCTACTTATT GCTGCCGCGG CTGGAGTGGC GACGTAGCGG TGGTACGGCG ACCTTACGCT TACATCTGCA CAGTGACGTT TCGCTACGCG ATGATGCGCG CCAGGCGAAA GCGTTTCTCG CTTCTCTGGT CGGCATTAAG CCTATTCCGG CGCTACGCCT TTCGCTCACG AGCGAACAAC ACTGGCCGGA CAAAGACGGT TGGGTGAAGC TGATTCAGCA GGCCACCCAC ACCATTGCGC AAGAGGCGTT TGATAAAGTT GTGCTGGCGC GGGCCACCGA CTTACAATTC TCCCGTCCGG TCAATGCCGC CGCGATGATG GCGTCCAGTC GTCGTTTAAA TCTCAACTGC TACCACTTTT TTATGGCCTT TTCCGCCGAT ACCGCCTTTC TGGGATCATC GCCGGAGCGG CTCTGGCGGC GGCGTGAAAC GGCGCTGCGT ACCGAAGCGC TGGCTGGGAC GGTGGCGAAC CATCCGGATA ACCATAAAGC CTGGCAGCTT GGCGAATGGT TAATGAAAGA CGATAAAAAC CAGCGAGAAA ATATGCTGGT TGTCGAAGAC ATCTGCCAGC GACTGCAAAA CTGCACCCAC TCGCTGGATG TGCTGCCGCC GCAGGTGCTC AGACTGCGCA AGGTTCAGCA TTTGCGCCGC TGTATCTGGA CGGCGCTTAA TCAGGCGGAC GACACGCTCT GCCTGCACCA GTTACAGCCT ACCGCAGCGG TCGCCGGGAT CCCTCGTGAA CCCGCGCGTT GTTTTATAGA ACAACATGAG CCGTTCGAAC GTGAATGGTA TGCCGGGTCG GCAGGCTATC TCTCCACGCG GCAAAGTGAG TTTTGCGTGA CGTTACGTTC AGCCAAAGTG ACGGCCAATG TGGTGCGATT GTATGCCGGC GCGGGAATCG TCCGCGGCTC CGATCCGGAA CAGGAATGGC AGGAAATAGA TAATAAAGCG GCCGGGTTAC GTACCTTATT GCAGATGGAT GCGTAA
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Protein sequence | MHSITTALEN LTRQLSQEIP ATPGLCVFDA PFPLNDAFDA LSWLASQSSF PQFYWQQRNG DEEAAVLGAI TVFSSLDLAQ RFLRQHAQPD LRIWGLNAFE PKEGYLLLPR LEWRRSGGTA TLRLHLHSDV SLRDDARQAK AFLASLVGIK PIPALRLSLT SEQHWPDKDG WVKLIQQATH TIAQEAFDKV VLARATDLQF SRPVNAAAMM ASSRRLNLNC YHFFMAFSAD TAFLGSSPER LWRRRETALR TEALAGTVAN HPDNHKAWQL GEWLMKDDKN QRENMLVVED ICQRLQNCTH SLDVLPPQVL RLRKVQHLRR CIWTALNQAD DTLCLHQLQP TAAVAGIPRE PARCFIEQHE PFEREWYAGS AGYLSTRQSE FCVTLRSAKV TANVVRLYAG AGIVRGSDPE QEWQEIDNKA AGLRTLLQMD A
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