| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2645 |
|---|
| Symbol | arnT |
|---|
| ID | 6872220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 2530120 |
|---|
| End bp | 2531766 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642785712 |
|---|
| Product | 4-amino-4-deoxy-L-arabinose transferase |
|---|
| Protein accession | YP_002216369 |
|---|
| Protein GI | 198243623 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT CGATACGCTA TTATCTGGCT TTCGCCGCAT TTATCGCGCT CTACTATGTT
ATTCCTGTCA ATAGCCGCCT GCTCTGGCAG CCGGATGAAA CGCGCTATGC CGAAATAAGT
CGGGAGATGC TGGCGTCTGG CGACTGGATC GTGCCGCATT TTCTGGGATT ACGTTATTTT
GAAAAACCGA TAGCCGGTTA CTGGATAAAC AGTCTGGGTC AGTGGCTTTT TGGCGCTACC
AATTTTGGCG TGCGGGCTGG CGCTATTTTA ACGACATTGC TGGCCGCAGC GCTGGTGGCG
TGGCTGACGT TCCGCTTATG GCGGGATAAA CGTACCGCGT TGCTCGCCTC CGTTATCTTT
CTCTCCCTCT TTGCCGTTTA CAGTATCGGG ACGTATGCGG TACTCGACCC GATGATCGCG
CTTTGGCTTA CGGCCGGTAT GTGTTGTTTC TGGCAGGGGA TGCAGGCCAC GACCCGAACG
GGCAAGATTG GGATGTTTTT GCTACTGGGC GCAACCTGCG GTCTGGGTGT ATTAACTAAA
GGGTTCCTCG CCCTGGCCGT ACCGGTGGTG AGCGTGCTGC CGTGGGTTAT TGTTCAGAAA
CGCTGGAAGG ACTTTTTGCT ATACGGCTGG CTGGCGGTCT TGAGCTGCTT TGTGGTTGTC
CTTCCCTGGG CGATCGCCAT TGCGCGACGC GAAGCCGATT TCTGGCATTA CTTTTTCTGG
GTGGAGCATA TCCAGCGATT CGCCATGAGC GATGCCCAGC ATAAAGCCCC TTTCTGGTAC
TATCTGCCGG TACTGCTCGC GGGAAGTTTA CCGTGGCTGG GGTTACTGCC TGGCGCGCTT
AAACTGGGCT GGCGCGAGCG AAACGGCGCA TTCTATTTGC TCGGATGGAC GATCATGCCG
CTTCTCTTTT TCAGCATTGC GAAAGGGAAA CTGCCCACCT ATGTTCTTTC CTGTTTCGCA
CCGATAGCGA TACTCATGGC GCGCTTCGTC CTGCATAACG TAAAAGAAGG CGTCGCCGCG
CTACGTGTCA ACGGCGGGAT CAACCTGGTG TTCGGGATAA TCGGGATCGT CGCGGCGTTT
GTCGTCTCCT CATGGGGCCC GCTGAAATCG CCGGTGTGGA CGCATATCGA AACCTATAAA
GTGTTTTGCG TCTGGGGCGT CTTTACTGTT TGGGCGTTTG TGGGCTGGTA TAGCCTCTGT
CATAGCCAAC AATACCTATT ACCCGCGTTT TGTCCGCTGG GACTGGCGCT GCTGTTCGGC
TTTTCCATCC CCGACAGGGT GATGGAGTCC AAACAGCCAC AGTTTTTTGT CGAAATGACC
CAGGCGCCTT TGGCATCAAG CCGCTATATT CTTGCCGACA ACGTCGGCGT CGCCGCCGGT
CTGGCCTGGA GTCTGAAACG AGACGATATT ATGCTCTACG GACACGCGGG CGAACTCAGG
TATGGCCTTA GCTATCCTGA TGTGCAGGAT AAATTCGTTA AAGCCGACGA TTTTAACGCC
TGGCTCAACC AGCATCGTCA GGAGGGCATT ATTACGCTAG TACTTTCAAT AGCCAAAGAC
GAAGACATCA GCGCTCTTTC CCTTCCCCCT GCGGACAATG TTGATTATCA GGGGCGTCTG
GTGTTAATTC AGTATCGGCC TAAATGA
|
|---|
| Protein sequence | MMKSIRYYLA FAAFIALYYV IPVNSRLLWQ PDETRYAEIS REMLASGDWI VPHFLGLRYF
EKPIAGYWIN SLGQWLFGAT NFGVRAGAIL TTLLAAALVA WLTFRLWRDK RTALLASVIF
LSLFAVYSIG TYAVLDPMIA LWLTAGMCCF WQGMQATTRT GKIGMFLLLG ATCGLGVLTK
GFLALAVPVV SVLPWVIVQK RWKDFLLYGW LAVLSCFVVV LPWAIAIARR EADFWHYFFW
VEHIQRFAMS DAQHKAPFWY YLPVLLAGSL PWLGLLPGAL KLGWRERNGA FYLLGWTIMP
LLFFSIAKGK LPTYVLSCFA PIAILMARFV LHNVKEGVAA LRVNGGINLV FGIIGIVAAF
VVSSWGPLKS PVWTHIETYK VFCVWGVFTV WAFVGWYSLC HSQQYLLPAF CPLGLALLFG
FSIPDRVMES KQPQFFVEMT QAPLASSRYI LADNVGVAAG LAWSLKRDDI MLYGHAGELR
YGLSYPDVQD KFVKADDFNA WLNQHRQEGI ITLVLSIAKD EDISALSLPP ADNVDYQGRL
VLIQYRPK
|
|---|
| |