Gene SeD_A2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2641 
Symbol 
ID6871324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2525105 
End bp2526262 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content56% 
IMG OID642785708 
ProductUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 
Protein accessionYP_002216365 
Protein GI198242590 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.607667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG GAAAAATGAT GTCGGACTTT TTGCCTTTCT CCCGTCCGGC GATGGGCGCG 
GAAGAGCTCG CTGCCGTTAA GACCGTACTG GACTCAGGTT GGATAACAAC CGGCCCGAAA
AATCAGGAAC TGGAAGCGGC GTTTTGTCGG CTAACTGGCA ATCAATATGC CGTTGCCGTC
AGTTCAGCCA CTGCCGGTAT GCACATCGCG TTGATGGCGC TGGGCATTGG TGAAGGCGAC
GAGGTCATTA CACCGTCAAT GACGTGGGTT TCTACGCTAA ATATGATCGT TTTACTCGGC
GCGACCCCCG TCATGGTCGA TGTCGATCGC GATACGCTGA TGGTCACGCC TGAACATATC
GAAGCCGCGA TTACGCCACA AACCAAAGCA ATTATCCCCG TCCACTACGC TGGCGCGCCC
GCCGATCTGG ACGCTATTTA CGCTCTTGGC GAGCGTTATG GCATCCCGGT GATTGAAGAC
GCGGCGCACG CGACAGGAAC CAGCTACAAA GGTCGCCACA TTGGCGCCCG GGGCACCGCG
ATTTTCTCCT TCCACGCCAT TAAGAACATC ACCTGCGCTG AAGGCGGTAT CGTCGTCACG
GATAACCCGC AATTCGCCGA TAAACTGCGC AGTCTCAAGT TTCACGGGCT TGGCGTTGAT
GCCTGGGATC GACAGTGCGG AGGACGCGCG CCACAAGCGG AAGTCCTGGC GCCGGGCTAC
AAATATAATT TGCCCGACCT CAACGCCGCT ATCGCGCTTG CTCAGTTACA GAAACTGGAT
GCGCTTAACG CTCGCCGCGC CGCCATCGCA GCGCAGTACC ACCAGGCAAT GGCAGACCTG
CCTTTTCAGC CTCTGAGCCT TCCGTCGTGG GAACATATTC ACGCCTGGCA TTTATTCATT
ATCCGGGTCG ATGAAGCCCG TTGCGGTATT ACCCGGGATG CTCTGATGGC ATCGCTGAAA
ACGAAAGGCA TCGGCACAGG GCTGCATTTC CGCGCCGCGC ATACGCAAAA ATATTATCGC
GAACGTTTCC CAACGCTCAC GCTGCCTGAC ACCGAGTGGA ACAGCGAGCG GATCTGCTCA
CTGCCGCTCT TCCCGGACAT GACCGAGAGT GACTTTGATC GGGTCATTAC CGCCCTTCAT
CAGATAGCAG GACAATAA
 
Protein sequence
MAEGKMMSDF LPFSRPAMGA EELAAVKTVL DSGWITTGPK NQELEAAFCR LTGNQYAVAV 
SSATAGMHIA LMALGIGEGD EVITPSMTWV STLNMIVLLG ATPVMVDVDR DTLMVTPEHI
EAAITPQTKA IIPVHYAGAP ADLDAIYALG ERYGIPVIED AAHATGTSYK GRHIGARGTA
IFSFHAIKNI TCAEGGIVVT DNPQFADKLR SLKFHGLGVD AWDRQCGGRA PQAEVLAPGY
KYNLPDLNAA IALAQLQKLD ALNARRAAIA AQYHQAMADL PFQPLSLPSW EHIHAWHLFI
IRVDEARCGI TRDALMASLK TKGIGTGLHF RAAHTQKYYR ERFPTLTLPD TEWNSERICS
LPLFPDMTES DFDRVITALH QIAGQ