| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2635 |
|---|
| Symbol | |
|---|
| ID | 6873914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2519366 |
|---|
| End bp | 2520571 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642785702 |
|---|
| Product | mandelate racemase/muconate lactonizing enzyme family protein |
|---|
| Protein accession | YP_002216359 |
|---|
| Protein GI | 198245002 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.944785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTC CTAAAATTAA ACACGTTCGA GCCTGGTTTA TTGGGGGCGC TACCGCAGAG
AAAGGGGCTG GCGGCGGGGA TTATCACGAC CAGGGAGGAA ATCACTGGAT TGATGACCAT
ATCGCCACTC CCATGAGCAA ATATCGCGAC TATGAGCAGT CTCGTCAGTC TTTTGGGATC
AACGTGTTAG GGACGCTGAT TGTCGAAGTA GAGGCGGAAA ATGGGCAGAC GGGGTTCGCC
GTTTCGACAG CAGGGGAGAT GGGCTGTTTT ATCGTAGAAA AACATCTTAA CCGGTTTATT
GAAGGCAAAT GCGTAAGCGA TATCAAACTT ATTCACGATC AGATGCTCGG CGCGACCATG
TACTACTCCG GTTCCGGCGG TCTGGTGATG AACACGATTT CCTGTGTGGA TCTGGCGTTG
TGGGATTTGT TTGGCAAGGT GGTTGGGCTG CCGGTTTATA AATTGCTGGG CGGAGCGGTG
CGCGATGAAA TTCAGTTTTA CGCCACCGGC GCACGCCCGG ATCTGGCTAA AGAAATGGGC
TTTATCGGCG GTAAAATGCC GACTCACTGG GGACCGCACG ATGGTGATGC GGGGATCCGT
AAAGATGCCG CGATGGTGGC GGATATGCGT GAAAAGTGCG GGCCGGATTT CTGGCTGATG
CTCGACTGCT GGATGAGTCA GGATGTGAAC TATGCGACTA AACTGGCTCA CGCCTGTGCG
CCATTTAATC TCAAATGGAT TGAAGAGTGT CTGCCGCCGC AGCAGTATGA AGGCTATCGC
GAATTAAAAC GCAACGCGCC TGCAGGGATG ATGGTTACCA GCGGCGAACA CCATGGTACG
CTGCAATCCT TCCGCACTCT GGCAGAAACC GGCATTGATA TTATGCAGCC GGATGTTGGC
TGGTGCGGCG GATTAACCAC GCTGGTTGAG ATCGCCGCGC TTGCCAAATC GCGCGGGCAA
CTGGTGGTGC CGCACGGTTC GTCTGTCTAT TCGCACCATG CAGTTATTAC TTTCACTAAT
ACCCCTTTCA GCGAGTTCCT GATGACCAGC CCGGACTGCT CCACCCTGCG TCCGCAATTT
GACCCGATTC TCCTGGATGA GCCGGTGCCG GTGAATGGAC GCATTCATAA ATCAGTGCTG
GATAAGCCGG GCTTCGGCGT CGAGCTTAAC CGTGACTGTC ACTTGAAACG CCCTTATAGC
CACTAA
|
|---|
| Protein sequence | MTLPKIKHVR AWFIGGATAE KGAGGGDYHD QGGNHWIDDH IATPMSKYRD YEQSRQSFGI
NVLGTLIVEV EAENGQTGFA VSTAGEMGCF IVEKHLNRFI EGKCVSDIKL IHDQMLGATM
YYSGSGGLVM NTISCVDLAL WDLFGKVVGL PVYKLLGGAV RDEIQFYATG ARPDLAKEMG
FIGGKMPTHW GPHDGDAGIR KDAAMVADMR EKCGPDFWLM LDCWMSQDVN YATKLAHACA
PFNLKWIEEC LPPQQYEGYR ELKRNAPAGM MVTSGEHHGT LQSFRTLAET GIDIMQPDVG
WCGGLTTLVE IAALAKSRGQ LVVPHGSSVY SHHAVITFTN TPFSEFLMTS PDCSTLRPQF
DPILLDEPVP VNGRIHKSVL DKPGFGVELN RDCHLKRPYS H
|
|---|
| |