Gene SeD_A2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2624 
Symbol 
ID6872046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2506336 
End bp2507553 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID642785692 
Productquinolone resistence NorA protein 
Protein accessionYP_002216349 
Protein GI198245203 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.321756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCATC TGAGCGGGTC GTTAAGAATG AAAGAAAAAT TATGGACGAA GGATTTTTGG 
GCAATCACCA TAGTCAGTTT TATTATCTTT TTTGTTTTTT ATGTACTGCT AACTTTATTA
CCCATTTATA TCGCTGACCG CCTGCATGCT TCTGCAGATA AGGCCGGGCT GTTAGTGACA
TGTTTCCTGG CCGCGGCAAT TGTTATTCGG CCGTTTGCCG GGCAGTGGGT GGGAAAATAT
TCGAATAAAA AGATTCTGGT GCTCTCTTCT CTGGCTTTTT TGGTGATTAC TGCGCTGTAT
CCGGTTTGCC ATTCTATCGA GTCGCTGCTC TTTATCCGCG TACTTCATGG GATTACGTTT
GGTGTTATTA CCACGGTAAA AGGAACTATT TCAGCGCGGT TAATTCCGGC CTCCCGACGT
GGAGAGGGCA TCAGCTTTTT CTCTTTAGCG ATGGGCCTGG CGATGGTCGT AGGACCGTGG
ATCGGTTTGA ATATGGCCCG CTGGAACGCG TTCACTGCCG CATTCTGGCT TTGTTCCGCT
GTAGCGGCGT TAGGGATTGT ACTTTCCCTG ATTGTGACGG TCCCTCCGGT AATTCGTCAT
GCCGATGGTT CGAAACCGAA TCTGGGTTTT GCCGCGATGT TTGACCGCGC CGCCTTGCCT
TTTGCGCTGG TCACCTTTTT TATGACTTTC TCCTATGCCG GCGTGTCGGC TTTCCTGGCG
CTGTATGCGC GTGAGCTGGA TTTAATGGCG GCGGCCAGTA ATTTCCTGCT GTGCTACGCG
ATTTTCCTGA TGATATGCCG TACCTTCACC GGGAATATTT GTGATAAAAA AGGGCCGAAA
TACGTTGTTT TCCCATGTCT GTTGGCTTTT ACCATCGGTC TGGTGGCGCT GGGCTACACC
AATGGCAGCA TCATGATGAT TATTTCCGGC GGTCTCATCG GTATCGGCTA CGGTTCGGTC
ACGCCGGTTT TCCAGACGCA AATTATCAGC TCGGTTGAAC CGCATAAAAT CGGCGTGGCG
AATTCACTGT TCTTTAACGC GATGGATGCC GGAATGGCGA TTGGCGCCTT TATCATGGGA
ATGATGGTTG AGTCGGTTGG CTATCGTATG ATTTATGTCG CTGGCGCGGT GCTGGTGGTA
CTCGCTGGCG CACTGTATGC CGTGCAGATG AAAAAACGTG GCGTGATGCC TTTGGTTTCC
ACCAGCGAGT TGCACTGA
 
Protein sequence
MRHLSGSLRM KEKLWTKDFW AITIVSFIIF FVFYVLLTLL PIYIADRLHA SADKAGLLVT 
CFLAAAIVIR PFAGQWVGKY SNKKILVLSS LAFLVITALY PVCHSIESLL FIRVLHGITF
GVITTVKGTI SARLIPASRR GEGISFFSLA MGLAMVVGPW IGLNMARWNA FTAAFWLCSA
VAALGIVLSL IVTVPPVIRH ADGSKPNLGF AAMFDRAALP FALVTFFMTF SYAGVSAFLA
LYARELDLMA AASNFLLCYA IFLMICRTFT GNICDKKGPK YVVFPCLLAF TIGLVALGYT
NGSIMMIISG GLIGIGYGSV TPVFQTQIIS SVEPHKIGVA NSLFFNAMDA GMAIGAFIMG
MMVESVGYRM IYVAGAVLVV LAGALYAVQM KKRGVMPLVS TSELH