Gene SeD_A2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2622 
SymbolnrdB 
ID6873138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2504950 
End bp2506080 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content52% 
IMG OID642785690 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_002216347 
Protein GI198242288 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.143362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACA CCACTTTTTC ACAGACGAAA AACGATCAGC TCAAGGAACC CATGTTCTTT 
GGCCAGCCGG TCAACGTTGC ACGCTATGAC CAGCAGAAAT ATGACATCTT CGAAAAACTG
ATCGAAAAAC AGCTCTCTTT CTTCTGGCGT CCGGAAGAGG TCGACGTCTC CCGCGATCGT
ATCGATTATC AGGCGTTGCC GGAGCACGAA AAACATATCT TCATCAGCAA CCTCAAATAC
CAGACGCTGC TGGATTCCAT TCAGGGACGT AGCCCGAACG TCGCCCTGCT GCCGCTCATT
TCCATCCCGG AGCTGGAGAC GTGGGTAGAG ACCTGGGCGT TTTCTGAGAC GATTCACTCA
CGATCCTATA CCCACATTAT TCGTAACATC GTCAACGATC CGGCGGTCGT GTTTGACGAT
ATCGTGACCA ATGAGCAAAT TCAGAAGCGC GCCGAAGGTA TCTCCGCCTA CTACGACGAA
CTTATTGAGA TGACCAGTTA CTGGCACCTG CTCGGTGAAG GCACCCATAC CGTTAATGGC
AAAACGGTTG TCGTGAATCT GCGTGAGCTG AAGAAAAAAC TGTATCTGTG CCTGATGAGC
GTGAACGCGC TGGAAGCCAT CCGCTTCTAC GTCAGCTTCG CCTGCTCTTT CGCATTTGCC
GAGCGTGAAC TGATGGAAGG CAACGCCAAA ATTATCCGTC TGATCGCCCG TGACGAAGCT
CTGCATCTGA CCGGCACGCA ACATATGCTG AACCTGTTGC GTAGCGGCGT GGACGACCCG
GAGATGGCGG AAATCGCCGA AGAGTGTAAA CAGGAATGTT ATGACCTGTT CGTGCAGGCG
GCGCAGCAGG AAAAAGAATG GGCGGACTAT CTGTTCCGCG ACGGTTCGAT GATCGGCCTG
AATAAAGATA TCCTGTGCCA ATACGTTGAA TATATTACTA ATATTCGTAT GCAGGCGGTG
GGGCTGGATC TGCCGTTCCA GACCCGCTCC AACCCAATCC CGTGGATCAA TACCTGGCTG
GTGTCCGATA ACGTTCAGGT CGCGCCACAG GAAGTGGAAG TTAGCTCTTA TCTGGTCGGA
CAAATCGATT CGGAAGTCGA TACCGACGAT CTGAGTAATT TCCAGCTCTG A
 
Protein sequence
MAYTTFSQTK NDQLKEPMFF GQPVNVARYD QQKYDIFEKL IEKQLSFFWR PEEVDVSRDR 
IDYQALPEHE KHIFISNLKY QTLLDSIQGR SPNVALLPLI SIPELETWVE TWAFSETIHS
RSYTHIIRNI VNDPAVVFDD IVTNEQIQKR AEGISAYYDE LIEMTSYWHL LGEGTHTVNG
KTVVVNLREL KKKLYLCLMS VNALEAIRFY VSFACSFAFA ERELMEGNAK IIRLIARDEA
LHLTGTQHML NLLRSGVDDP EMAEIAEECK QECYDLFVQA AQQEKEWADY LFRDGSMIGL
NKDILCQYVE YITNIRMQAV GLDLPFQTRS NPIPWINTWL VSDNVQVAPQ EVEVSSYLVG
QIDSEVDTDD LSNFQL