Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2622 |
Symbol | nrdB |
ID | 6873138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2504950 |
End bp | 2506080 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642785690 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_002216347 |
Protein GI | 198242288 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.143362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATACA CCACTTTTTC ACAGACGAAA AACGATCAGC TCAAGGAACC CATGTTCTTT GGCCAGCCGG TCAACGTTGC ACGCTATGAC CAGCAGAAAT ATGACATCTT CGAAAAACTG ATCGAAAAAC AGCTCTCTTT CTTCTGGCGT CCGGAAGAGG TCGACGTCTC CCGCGATCGT ATCGATTATC AGGCGTTGCC GGAGCACGAA AAACATATCT TCATCAGCAA CCTCAAATAC CAGACGCTGC TGGATTCCAT TCAGGGACGT AGCCCGAACG TCGCCCTGCT GCCGCTCATT TCCATCCCGG AGCTGGAGAC GTGGGTAGAG ACCTGGGCGT TTTCTGAGAC GATTCACTCA CGATCCTATA CCCACATTAT TCGTAACATC GTCAACGATC CGGCGGTCGT GTTTGACGAT ATCGTGACCA ATGAGCAAAT TCAGAAGCGC GCCGAAGGTA TCTCCGCCTA CTACGACGAA CTTATTGAGA TGACCAGTTA CTGGCACCTG CTCGGTGAAG GCACCCATAC CGTTAATGGC AAAACGGTTG TCGTGAATCT GCGTGAGCTG AAGAAAAAAC TGTATCTGTG CCTGATGAGC GTGAACGCGC TGGAAGCCAT CCGCTTCTAC GTCAGCTTCG CCTGCTCTTT CGCATTTGCC GAGCGTGAAC TGATGGAAGG CAACGCCAAA ATTATCCGTC TGATCGCCCG TGACGAAGCT CTGCATCTGA CCGGCACGCA ACATATGCTG AACCTGTTGC GTAGCGGCGT GGACGACCCG GAGATGGCGG AAATCGCCGA AGAGTGTAAA CAGGAATGTT ATGACCTGTT CGTGCAGGCG GCGCAGCAGG AAAAAGAATG GGCGGACTAT CTGTTCCGCG ACGGTTCGAT GATCGGCCTG AATAAAGATA TCCTGTGCCA ATACGTTGAA TATATTACTA ATATTCGTAT GCAGGCGGTG GGGCTGGATC TGCCGTTCCA GACCCGCTCC AACCCAATCC CGTGGATCAA TACCTGGCTG GTGTCCGATA ACGTTCAGGT CGCGCCACAG GAAGTGGAAG TTAGCTCTTA TCTGGTCGGA CAAATCGATT CGGAAGTCGA TACCGACGAT CTGAGTAATT TCCAGCTCTG A
|
Protein sequence | MAYTTFSQTK NDQLKEPMFF GQPVNVARYD QQKYDIFEKL IEKQLSFFWR PEEVDVSRDR IDYQALPEHE KHIFISNLKY QTLLDSIQGR SPNVALLPLI SIPELETWVE TWAFSETIHS RSYTHIIRNI VNDPAVVFDD IVTNEQIQKR AEGISAYYDE LIEMTSYWHL LGEGTHTVNG KTVVVNLREL KKKLYLCLMS VNALEAIRFY VSFACSFAFA ERELMEGNAK IIRLIARDEA LHLTGTQHML NLLRSGVDDP EMAEIAEECK QECYDLFVQA AQQEKEWADY LFRDGSMIGL NKDILCQYVE YITNIRMQAV GLDLPFQTRS NPIPWINTWL VSDNVQVAPQ EVEVSSYLVG QIDSEVDTDD LSNFQL
|
| |