Gene SeD_A2619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2619 
Symbol 
ID6873976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2500501 
End bp2501385 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content36% 
IMG OID642785687 
Productputative GntR family regulatory protein 
Protein accessionYP_002216344 
Protein GI198244118 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.390234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.158643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTA AAAAACAATA CAATTCAAAA GCTAATGTGT CATATCTGAT ATATCAGCAA 
GCAAACTTAA TGAAATATAC AATAACAACA ATAAAGTATG TAAATTTTCT TATATCTGAT 
ATATTAGATC CGTTAATTTT GAATAAATTA ATTACAATGG AGCCGGGTTT AACCATGGAG 
GAGAAGAAAA TGAAAAATAG ATTAAAGCGT GACTTTAGTC ACATATCAAT TGAAATACCC 
AAATCCATCA CCCAGGTGAT TAAAGAGAAA ATAAGGGAGA TGATTATCCA TGGCGATTTC 
GATCTTGGGC AAGCGATCAG TGAAAATGAA CTATCAAATA TTCTGATGGT AAGTAAAACA 
CCAATTCGTG AAGCTTTTAT TTGGCTGAGC TATAATGAAA ACTTAGTCAA CATCATTCCC 
CGCAGTGGGA CATTTGTTTT TTCTGTCACC GACGAGGATA TCAATGATCT CATCAAAATG 
AGGGTTATCC TTGAACAGGG CGCAATTCGT GAAGCGATGG AGAAAAATGC TAACAATGTC 
ATAGTCGAAT TAAGCAATAT TTTATCGAAG TCAGCAAAAA TTAATGCAGA GCGAGATACG 
CAAGCTTACC TCAAACTGGA TCATGATTTT CATTATGTTT TTGTGAAATA TGCCGATAAT 
AAATACATTT CACAAGCACA CCTGTTGATC TCAGCACGTT TATTGGCAAT TCGCTACAGA 
CTGGATTTTA CCGCTGAATA TATCACCAGC TCTAACCGTG GACATGCCAC TATTTTGGAT 
ATGTTAAAAA ACAACAACGT CGAGGGCGTC TGTAATTTTA TCACGCACCA CATCGGTAGC 
GGTTTTACAG AACGCGCAAG AAAACTTCTT GCGCTGAAAG CGTAA
 
Protein sequence
MLRKKQYNSK ANVSYLIYQQ ANLMKYTITT IKYVNFLISD ILDPLILNKL ITMEPGLTME 
EKKMKNRLKR DFSHISIEIP KSITQVIKEK IREMIIHGDF DLGQAISENE LSNILMVSKT 
PIREAFIWLS YNENLVNIIP RSGTFVFSVT DEDINDLIKM RVILEQGAIR EAMEKNANNV 
IVELSNILSK SAKINAERDT QAYLKLDHDF HYVFVKYADN KYISQAHLLI SARLLAIRYR 
LDFTAEYITS SNRGHATILD MLKNNNVEGV CNFITHHIGS GFTERARKLL ALKA