Gene SeD_A2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2618 
Symbol 
ID6873760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2499126 
End bp2500451 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content42% 
IMG OID642785686 
Productputative permease 
Protein accessionYP_002216343 
Protein GI198244581 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.10698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.142697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTC CACAAGAAAA TTTATACGAT GCAATTCGTA TTGTAAAAAG GAAAATCATT 
CCTTTGGCCT TTATTCTTTA CTTTTTTAAC TATATGGATC GTGTCAATAT TGGGTTTGCT 
GCATTACGCA TGAATGAATC TCTCGGTATT ACGCCTGAGG ATTTCGCTAA TATTTCTTCT 
ATATTCTTCA TATCATATTT AATCTTTCAA ATTCCGAGTA GCATTGGCTT GCAAAAGCTT 
GGTGCAAGAA AATGGATTAG TTCCATTATT ATCGGCTGGG GAGCGGTAAC AGGGCTGATT 
TTTTTTGCTA AAGATACTCA ACATATTTTG CTGGCTCGCA TTTTTTTGGG GGTATTTGAA 
GCTGGCTTTT TCCCGGGCAT GGTTTATTAT CTTGCATGCT GGTTCCCGGC TCGTGAACGC 
GGAAAAGTCA ATAGTTTCTT CATGTTATCT ATTGCTGTTG CATCGGTATT GGCTGCGCCG 
ATGTCTGGTT GGATCATCGA GCATTTGAAT ACCCCGGATT ATGAAGGCTG GCGCTGGCTT 
TTTGCTATTG AAGGTATCCC TACCGTATTC CTTGGCATCC TGACATTTTA TTTACTGCCT 
GACAGTCCAG AAAAGGCTAA ATGGCTTACG CCACAGCAGA TATCGGCCTT AGTTAATAAA 
TTACGCACTG ACAATGAAAC CGCAGCTGCA TTAAATAAAA ATACCAACTC ATCCTTTCTT 
TCCGTAATCA AAAATCCAGT TTTGCTTCAG CTTTCTTTCG CCTACATGTT GATTCAGGCG 
GCTGCTCTGG CGGCAAACTA CTGGTTGCCG GGGTTGGTGA AGGGATTTTC AGCTGATTTT 
ACGGATACTG ACGTTGGCTT AATCATGAGT ATTCCGTTTA TTTTCGCTAT GTTCAGCATG 
CCCTGGTGGG GCTGGCATTC CGATAAAAAG AATGAACGAA AATGGCATGC TGCATTACCC 
ATTTTTCTGG CAGGCTGTGG TTTTCTGATG ATTGCTCTTG TCCCCTCAAT GTCGCTGAGA 
ATGCTGGGGC TAACGTTCTA TGGTGTTGGG ATCCTCAGCT ATTACGGACC TTACTGGGCG 
CTGCCTTCTG CATTATTGTC GCCGTCAGGG TTGGCTATCA GCATTGCGTT TATTAACTCA 
TGTTCAAGTC TTGGCGGATT CCTGATTAAT AAATCACTGG GATTCGTTTC TACTCATTAT 
GGTGCGACAG GAATATTTAT TGTAGAGGCA ATACTTTGCT TCGCTGCGGT AGCCGTTTTG 
GCGTTAATGA AAATTGATGT GAAAAAAGAA AAAAGCCAAC AAACAAATGT TGTATCACGA 
ACCTGA
 
Protein sequence
MSSPQENLYD AIRIVKRKII PLAFILYFFN YMDRVNIGFA ALRMNESLGI TPEDFANISS 
IFFISYLIFQ IPSSIGLQKL GARKWISSII IGWGAVTGLI FFAKDTQHIL LARIFLGVFE 
AGFFPGMVYY LACWFPARER GKVNSFFMLS IAVASVLAAP MSGWIIEHLN TPDYEGWRWL 
FAIEGIPTVF LGILTFYLLP DSPEKAKWLT PQQISALVNK LRTDNETAAA LNKNTNSSFL 
SVIKNPVLLQ LSFAYMLIQA AALAANYWLP GLVKGFSADF TDTDVGLIMS IPFIFAMFSM 
PWWGWHSDKK NERKWHAALP IFLAGCGFLM IALVPSMSLR MLGLTFYGVG ILSYYGPYWA 
LPSALLSPSG LAISIAFINS CSSLGGFLIN KSLGFVSTHY GATGIFIVEA ILCFAAVAVL 
ALMKIDVKKE KSQQTNVVSR T