| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2607 |
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| Symbol | |
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| ID | 6872612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2483634 |
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| End bp | 2484284 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642785677 |
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| Product | alpha-ketoglutarate-dependent dioxygenase AlkB |
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| Protein accession | YP_002216334 |
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| Protein GI | 198242580 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.57435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGATC TGTTTGCTGA TGAAGCGCCC TGGCAAGAGT CCCTGGCGCC TGGCGCGGTG
GTGTTGCGCC GCTTTGCGTT TCGCGCGGCG CAGTCGCTAT TAGACGATAT CGGGTTTGTC
GCCAGTCAGT CACCGTTTCG TCAGATGGTG ACGCCGGGCG GCTACACCAT GTCGGTGGCG
ATGACCAACT GCGGCGCGTT AGGGTGGACC ACCGATCGTC ACGGTTATTG TTATGCCGTG
CGCGATCCGT TGACCGATAA ACCCTGGCCT GCGCTGCCGT TATCGTTTGC CAGCGTATGT
CGTCAGGCGG CAATCGCGGC AGGGTATGCG AGCTTCCAAC CGGACGCCTG CCTGATCAAT
CGCTACGCGC CCGGCGCAAA ACTGTCGCTG CATCAGGATA AAGACGAGCC GGATCTGCGC
GCGCCTATTA TCTCAGTTTC GTTGGGGGTG CCGGCGGTTT TTCAGTTTGG CGGCCTGCGT
CGCAGCGACC CGATCCAGCG GATCTTACTG GAGCATGGCG ATATCGTGGT CTGGGGCGGC
GAGTCCCGGC TGTTTTATCA TGGTATCCAG CCGCTTAAAG CGGGCTTTCA TCCCATGACC
GGTGAATTTC GTTACAATCT CACCTTCCGT CAGGCAGCTG AAAAAGAATA A
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| Protein sequence | MLDLFADEAP WQESLAPGAV VLRRFAFRAA QSLLDDIGFV ASQSPFRQMV TPGGYTMSVA
MTNCGALGWT TDRHGYCYAV RDPLTDKPWP ALPLSFASVC RQAAIAAGYA SFQPDACLIN
RYAPGAKLSL HQDKDEPDLR APIISVSLGV PAVFQFGGLR RSDPIQRILL EHGDIVVWGG
ESRLFYHGIQ PLKAGFHPMT GEFRYNLTFR QAAEKE
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