Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2606 |
Symbol | |
ID | 6872075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2481915 |
End bp | 2483558 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642785676 |
Product | multidrug transporter membrane component/ATP-binding component |
Protein accession | YP_002216333 |
Protein GI | 198243297 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.421304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.757942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTC TTATTCTTGT CTGGCGGCAG TACCGCTGGC CATTTATTAG CGTGATGGCG CTGAGCCTCG CCAGCGCGGC GCTGGGGATT GGCCTGATCG CGTTTATCAA TCAGCGCCTG ATTGAAACGG TGGACACCAA CGTCATGGTG CTGCCGGAAT TTCTCGGCCT GCTCCTGTTG CTAATGGTCG TCACATTAGG TTCCCAACTG GCGCTCACCA CTCTGGGACA CCATTTCGTT TACCGCCTGC GCAGCGAATT TATCAAGCGC ATTCTGGATA CGCACGTTGA ACGCATTGAG CAACTGGGCA GCGCCTCTTT ACTGGCCGGT CTGACCAGCG ATATTCGCAA TATTACTATC GCCTTTGTGC GTCTGCCTGA GCTGGTGCAG GGCATTATCC TCACCGTCGG CTCGGCGGCG TATCTGGCGA TGCTATCGAC AAAAATGCTG CTGGTTACGG CTATCTGGAT GGCGGTCACT ATCTGGGGCG GATTTGTGCT GGTGGCGCGG GTTTACCAGC ATATGGCGAC CCTGCGCGAG ACCGAAGATA AGCTGTACAA CGACTATCAG ACGGTGTTGG AAGGACGCAA AGAGCTGACG CTAAACCGCG AGCGTGCGGA GCAGATTTTT CAGCAATGCT ATATCCCGGA CGCCAAAGAG TACCGTCATC ACATTATCCG TGCCGATACT TTTCACCTGA GCGCCGTCAA CTGGTCGAAT ATCATGATGC TGGGGGCGAT AGGCCTGGTC TTCTGGATGG CGAATAGTCT CGGCTGGGCG GATACCAACG TCGCGGCGAC TTATTCACTG ACGTTGCTGT TCCTGCGCAC GCCGCTGCTG TCTGCGGTGG GGGCGTTGCC AACGCTACTG ACCGCCCAGG TGGCGTTTAA TAAACTGAAT AAATTCGCGC TCGCCCCGTA TAAGCCTGAT TTTCCGCAGC CGAAAGCCTT TCCCGACTGG AAGACGCTGG AGCTGCGCAA CGTGGTTTTC CACTATCAGG ATAACGCGTT TTCCGTGGGG CCCATCAACC TGACGATTCA CCGCGGCGAA CTGCTGTTTT TAATTGGCGG CAACGGTAGC GGGAAATCGA CGCTGGCCAT GTTATTGACC GGATTATACC AGCCGCAATC GGGAACGATT TTACTTGATG GTCAACCTAT TGCCGCCGGG CAGCCGGAAG ATTATCGCAA ACTGTTTTCT GCGGTGTTCA CCGATGTGTG GTTATTCGAC CGCCTGCTGG GGCCGCAGGG GAAACCCGCC AATCCCGCTC TGGTCGAAAA GTGGCTTGAG CACCTGAAAA TGACGCACAA GCTGGAGCTA AACGACGGGC GCATTTTGAA TCTTAAACTG TCGAAAGGGC AAAAAAAGCG CATTGCGCTG CTGCTGGCGC TGGCGGAAGA GCGCGATATT ATTTTGCTGG ATGAGTGGGC CGCCGATCAG GACCCGCATT TCCGCCGGGA GTTTTATCAG GTACTGTTGC CGTTAATGCA GGAAATGGGC AAAACCATTT TCGCCATCAG CCATGATGAT CACTATTTTA TTCACGCCGA TCGTCTGCTT GAAATGCGTA ACGGACAGCT AACCGAACTC ACCGGCGACG AACGTGACGC CGCCTCGCGT GATGCGGTTG CGCGTACTGC GTAA
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Protein sequence | MELLILVWRQ YRWPFISVMA LSLASAALGI GLIAFINQRL IETVDTNVMV LPEFLGLLLL LMVVTLGSQL ALTTLGHHFV YRLRSEFIKR ILDTHVERIE QLGSASLLAG LTSDIRNITI AFVRLPELVQ GIILTVGSAA YLAMLSTKML LVTAIWMAVT IWGGFVLVAR VYQHMATLRE TEDKLYNDYQ TVLEGRKELT LNRERAEQIF QQCYIPDAKE YRHHIIRADT FHLSAVNWSN IMMLGAIGLV FWMANSLGWA DTNVAATYSL TLLFLRTPLL SAVGALPTLL TAQVAFNKLN KFALAPYKPD FPQPKAFPDW KTLELRNVVF HYQDNAFSVG PINLTIHRGE LLFLIGGNGS GKSTLAMLLT GLYQPQSGTI LLDGQPIAAG QPEDYRKLFS AVFTDVWLFD RLLGPQGKPA NPALVEKWLE HLKMTHKLEL NDGRILNLKL SKGQKKRIAL LLALAEERDI ILLDEWAADQ DPHFRREFYQ VLLPLMQEMG KTIFAISHDD HYFIHADRLL EMRNGQLTEL TGDERDAASR DAVARTA
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