Gene SeD_A2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2586 
Symbol 
ID6871768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2465981 
End bp2466358 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content49% 
IMG OID642785657 
Productputative virulence protein MsgA 
Protein accessionYP_002216314 
Protein GI198243191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0867466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGA CGAGGCGGCT GCCGCCGTTC TGGCTGTGTC AGCCGACGCC GCGCTGGCTG 
ATGCCTCCCC GGCTTTTGTG GTCGCCGTAC CTGCGCTGCT CTCAGCAGAT GCTGCGGATG 
AAGCTGCCGA CCAAAATTCC CCTTGAAAAC CAGCCTGTCA GGGCTGGTTT TTTTATGCCT 
ACAATTAAAA AGTTAGCTGA TGCCAGAGAC GTTATTTTGC ATGAACTGAT TTTGCATGAA 
CTGATTGGAC ATCTTTCCTG TGCAGTGGTC ACAGTAAAGT CAATGCAGGC AACTAACGTA 
AACCATGTTT GTACTAAAAC AGAAAAAGCG CATCTACACC CTATACTGGA AAAAATGTTT 
GCAGTGGCAG GTAAATGA
 
Protein sequence
MLMTRRLPPF WLCQPTPRWL MPPRLLWSPY LRCSQQMLRM KLPTKIPLEN QPVRAGFFMP 
TIKKLADARD VILHELILHE LIGHLSCAVV TVKSMQATNV NHVCTKTEKA HLHPILEKMF 
AVAGK