Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2568 |
Symbol | |
ID | 6873872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2448608 |
End bp | 2449702 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642785643 |
Product | inner membrane ABC transporter permease YejB |
Protein accession | YP_002216301 |
Protein GI | 198245447 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0013511 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGTGCCT ATCTTATCCG CCGTCTGTTA CTGGTGATCC CCACGCTATG GGCCATTATT ACCATTAACT TTTTTATCGT GCAGATCGCT CCCGGCGGCC CTGTCGATCA GGCGATTGCC GCGATTGAAT TTGGTCAGGG CGGCGCGTTG CCCGGCGCCA GCGGCGAAGG CGTTCGCGCC AGTCATGCGC AAACCGGCGT CGGCAATATC AGCGACAGCC ATTATCGCGG CGGCCGGGGA CTCGATCCGG AGGTGATCGC GGAGATCACC CATCGCTACG GCTTCGACAA ACCGCTGCAT GAGCGTTATT TCAAGATGCT ACGGGACTAT CTCTCTTTTG ACTTCGGCGA CAGTCTGTTT CGCAGCGCAT CCGTACTGGC GCTGATCAAA GATAGTCTTC CCGTCTCCAT TACCCTGGGA TTATGGAGCA CGCTGATTAT TTATCTGGTG TCTATCCCGC TGGGGATCCG CAAAGCCGTC CATAACGGCA GTCGCTTTGA TGTGTGGAGC AGCGCGTTTA TCATTATCGG TTATGCGATC CCCGCCTTTC TGTTCGCTAT TTTATTAATC GTCTTTTTTG CCGGCGGCAG CTACTACGAT ATCTTTCCGC TACGTGGCCT GGTCTCCGCC AACTTTGACA CGTTACCGTG GTACCAGAAA ATCACCGATT ATTTGTGGCA TATTACGCTA CCGGTGTTGG CGACCGTCAT CGGCGGTTTT GCCGCCCTGA CGATGCTGAC GAAAAATTCG TTTCTCGACG AGGTGCGTAA ACAGTATGTC GTTACCGCTC GCGCTAAAGG CGTGAGTGAA AAAAACATTC TCTGGAAACA TGTTTTTCGT AACGCCATGC TGCTGGTGAT CGCCGGGTTT CCCGCCACTT TTATCAGTAT GTTTTTCACC GGCTCGCTGC TAATTGAAGT CATGTTCTCG CTCAACGGCC TGGGGCTGCT GGGTTATGAA GCAACCGTTT CGCGCGACTA TCCGGTGATG TTCGGCACGC TTTATATCTT TACCCTGATT GGCTTATTAC TGAATATCCT GAGCGATATC AGCTATACGC TGGTCGATCC ACGCATTGAT TTTGAGGGAC GATAA
|
Protein sequence | MGAYLIRRLL LVIPTLWAII TINFFIVQIA PGGPVDQAIA AIEFGQGGAL PGASGEGVRA SHAQTGVGNI SDSHYRGGRG LDPEVIAEIT HRYGFDKPLH ERYFKMLRDY LSFDFGDSLF RSASVLALIK DSLPVSITLG LWSTLIIYLV SIPLGIRKAV HNGSRFDVWS SAFIIIGYAI PAFLFAILLI VFFAGGSYYD IFPLRGLVSA NFDTLPWYQK ITDYLWHITL PVLATVIGGF AALTMLTKNS FLDEVRKQYV VTARAKGVSE KNILWKHVFR NAMLLVIAGF PATFISMFFT GSLLIEVMFS LNGLGLLGYE ATVSRDYPVM FGTLYIFTLI GLLLNILSDI SYTLVDPRID FEGR
|
| |