Gene SeD_A2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2568 
Symbol 
ID6873872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2448608 
End bp2449702 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID642785643 
Productinner membrane ABC transporter permease YejB 
Protein accessionYP_002216301 
Protein GI198245447 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0013511 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGCCT ATCTTATCCG CCGTCTGTTA CTGGTGATCC CCACGCTATG GGCCATTATT 
ACCATTAACT TTTTTATCGT GCAGATCGCT CCCGGCGGCC CTGTCGATCA GGCGATTGCC
GCGATTGAAT TTGGTCAGGG CGGCGCGTTG CCCGGCGCCA GCGGCGAAGG CGTTCGCGCC
AGTCATGCGC AAACCGGCGT CGGCAATATC AGCGACAGCC ATTATCGCGG CGGCCGGGGA
CTCGATCCGG AGGTGATCGC GGAGATCACC CATCGCTACG GCTTCGACAA ACCGCTGCAT
GAGCGTTATT TCAAGATGCT ACGGGACTAT CTCTCTTTTG ACTTCGGCGA CAGTCTGTTT
CGCAGCGCAT CCGTACTGGC GCTGATCAAA GATAGTCTTC CCGTCTCCAT TACCCTGGGA
TTATGGAGCA CGCTGATTAT TTATCTGGTG TCTATCCCGC TGGGGATCCG CAAAGCCGTC
CATAACGGCA GTCGCTTTGA TGTGTGGAGC AGCGCGTTTA TCATTATCGG TTATGCGATC
CCCGCCTTTC TGTTCGCTAT TTTATTAATC GTCTTTTTTG CCGGCGGCAG CTACTACGAT
ATCTTTCCGC TACGTGGCCT GGTCTCCGCC AACTTTGACA CGTTACCGTG GTACCAGAAA
ATCACCGATT ATTTGTGGCA TATTACGCTA CCGGTGTTGG CGACCGTCAT CGGCGGTTTT
GCCGCCCTGA CGATGCTGAC GAAAAATTCG TTTCTCGACG AGGTGCGTAA ACAGTATGTC
GTTACCGCTC GCGCTAAAGG CGTGAGTGAA AAAAACATTC TCTGGAAACA TGTTTTTCGT
AACGCCATGC TGCTGGTGAT CGCCGGGTTT CCCGCCACTT TTATCAGTAT GTTTTTCACC
GGCTCGCTGC TAATTGAAGT CATGTTCTCG CTCAACGGCC TGGGGCTGCT GGGTTATGAA
GCAACCGTTT CGCGCGACTA TCCGGTGATG TTCGGCACGC TTTATATCTT TACCCTGATT
GGCTTATTAC TGAATATCCT GAGCGATATC AGCTATACGC TGGTCGATCC ACGCATTGAT
TTTGAGGGAC GATAA
 
Protein sequence
MGAYLIRRLL LVIPTLWAII TINFFIVQIA PGGPVDQAIA AIEFGQGGAL PGASGEGVRA 
SHAQTGVGNI SDSHYRGGRG LDPEVIAEIT HRYGFDKPLH ERYFKMLRDY LSFDFGDSLF
RSASVLALIK DSLPVSITLG LWSTLIIYLV SIPLGIRKAV HNGSRFDVWS SAFIIIGYAI
PAFLFAILLI VFFAGGSYYD IFPLRGLVSA NFDTLPWYQK ITDYLWHITL PVLATVIGGF
AALTMLTKNS FLDEVRKQYV VTARAKGVSE KNILWKHVFR NAMLLVIAGF PATFISMFFT
GSLLIEVMFS LNGLGLLGYE ATVSRDYPVM FGTLYIFTLI GLLLNILSDI SYTLVDPRID
FEGR