| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2567 |
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| Symbol | |
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| ID | 6875581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2446793 |
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| End bp | 2448598 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642785642 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_002216300 |
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| Protein GI | 198244480 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.00156108 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCGC GCGTAATGCT TCTGCTTGTC GCACTGGTTA GCGCTGGCGC CCAGGCCCAG
GAAATCAAAG AAAGCTACGC TTTCGCCGTA CTCGGCGAAC CTAAGTATGC TTTTAACTTT
AATCACTTTG ATTATGTGAA TCCTGCTGCG CCGAAAGGCG GTCAGATGAC GCTTTCCGCC
ATTGGTACGT TCGATAATTT CAATCGCTAC TCGCTGCGCG GCAATCCCGG CGTACGTACC
GAAGCCCTTT ACGATACGCT TTTTACCACC TCGGATGATG AGCCCGGAAG CTATTATCCG
CTGATTGCCG ACCATGCCCG CTATGCCGCC GACTATTCCT GGGTGGAAAT CTCGATTAAC
CCCCGCGCTC GTTTTCACGA TGGCACGCCC ATTACCGCCC GCGATGTGGC CTTTACCTTT
CATAAGTTTA TGACCGAAGG CGTACCGCAG TTCCGTCTGG TCTATAAAGG TACTACCGTG
AAGGCGATTG CGCCTTTAAC CGTGCGAATT GAGCTGGCGA AGCCTGGTAA AGAAGACATG
CTTAGTCTGT TTTCACTACC GATCATGCCC GAAAAATTCT GGAAAAATCA CAAACTCAGC
GATCCACTTT CAACGCCGCC CTTAGCCAGC GGGCCATACC GGATTACTCA GTGGAAAATG
GGCCAGTACA TTGTCTATTC ACGCGTCAAA AACTACTGGG CGGCTAATCT GCCGGTCAAT
CGTGGACGTT TTAACCTCGA CACTATCCGC TACGATTACT ACCTTGATGA CAATGTCGCT
TTCGAGGCGT TTAAAGCGGG CGCATTTGAT CTACGGCTGG AAAACGACGC TAAAAACTGG
GCAACGCGCT ATATCGGTAA AAATTTCGAT AATCATTACA TCATTAAAGA AGAGCAGAAA
AACGAGTCGG CGCAGGACAC ACGCTGGCTG GCCTTTAATA TTCAGCGCCA GGTATTTAAA
GACCGGCGGG TACGTGAAGC TGTCACCCTG GCCTTCGATT TTGAGTGGAT GAATAAAGCG
CTGTTCTATA ATGCCTGGAG CCGAACCAAC AGTTACTTCC AGAATACCGA GTACGCCGCC
AGAAATTACC CTGACGCCGA TGAGCTGGTA TTACTCGCGC CGATGAAAAA AGATCTTCCT
CCTGAAGTCT TCACTCAGAT CTATCAGCCG CCGGTCTCTA ACGGCGACGG CTACGATCGC
GAAAATCTTC TTAAAGCTGA CGCCTTGTTG ACGCAGGCCG GATGGGTGAT CAACGGACAG
CAACGGGTCA ATAGCGTCAC CGGTAAGCCT CTGACGTTTG AACTTCTCCT TCCTGCCAGC
AGTAATAGCC AGTGGGTTCT GCCCTTCCAG CATAATCTTC AGCGTCTGGG CATTACGATG
ACTATCCGTC AGGTTGATAA TTCTCAGCTC ACCAACCGGA TGCGTAGCCG CGACTATGAC
ATGATGCCGA GGCTATGGCG GGCGATGCCC TGGCCCAGCT CCGATCTACA AATCTCATGG
GCGTCGGAAT ACATTGACTC CAGTTATAAC GCTCCCGGCG TACAAAGCCC GGTGGTGGAT
AAACTGATCG CGCAAATTAT CGCAGCGCAG GGTGATAAAG CGAAACTGGT GCCGCTGGGA
CGGGCGCTGG ATCGCGTGCT GACCTGGAAC TATTACATGC TGCCGATGTG GTATATGGCG
CAAGACAGGC TCGCCTGGTG GGATAAATTC TCCCATCCGG CGATTCGCCC GGTATATACC
ATCGGGTTAG ATACCTGGTG GTATGATGTC AACAAAGCCG CCAAGCTACC GGCAGCCAGG
AGGTAG
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| Protein sequence | MIARVMLLLV ALVSAGAQAQ EIKESYAFAV LGEPKYAFNF NHFDYVNPAA PKGGQMTLSA
IGTFDNFNRY SLRGNPGVRT EALYDTLFTT SDDEPGSYYP LIADHARYAA DYSWVEISIN
PRARFHDGTP ITARDVAFTF HKFMTEGVPQ FRLVYKGTTV KAIAPLTVRI ELAKPGKEDM
LSLFSLPIMP EKFWKNHKLS DPLSTPPLAS GPYRITQWKM GQYIVYSRVK NYWAANLPVN
RGRFNLDTIR YDYYLDDNVA FEAFKAGAFD LRLENDAKNW ATRYIGKNFD NHYIIKEEQK
NESAQDTRWL AFNIQRQVFK DRRVREAVTL AFDFEWMNKA LFYNAWSRTN SYFQNTEYAA
RNYPDADELV LLAPMKKDLP PEVFTQIYQP PVSNGDGYDR ENLLKADALL TQAGWVINGQ
QRVNSVTGKP LTFELLLPAS SNSQWVLPFQ HNLQRLGITM TIRQVDNSQL TNRMRSRDYD
MMPRLWRAMP WPSSDLQISW ASEYIDSSYN APGVQSPVVD KLIAQIIAAQ GDKAKLVPLG
RALDRVLTWN YYMLPMWYMA QDRLAWWDKF SHPAIRPVYT IGLDTWWYDV NKAAKLPAAR
R
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