| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2554 |
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| Symbol | |
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| ID | 6873355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2434107 |
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| End bp | 2435795 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642785629 |
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| Product | PTS system fructose-specific transporter subunits IIBC |
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| Protein accession | YP_002216287 |
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| Protein GI | 198244051 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.695435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.000294778 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACGC TGCTGATAAT TGACGCTAAT CTCGGCCAGG CTCGCGCTTA CATGGCGAAA
ACCCTGCTTG GAGCGGCGGC GCATAAAGCA AATCTGGAAA TTATCGACAA TCCGAATGAT
GCTGAGCTGG CGATCGTGCT GGGCGAATCT CTGCCGAACG ACAATGCTCT GAACGGCAAA
AAGGTTTGGC TGGGGGATAT TGGTCGCGCC GTCGCGCATC CGGAACTGTT TCTGAGTGAA
GCCAAAAGCC ATGCGACCCT TTACAGCGCC CCTGCTGCGG CTGCTCCTGC GGCGAGCGGC
GGTCCGAAAC GCGTGGTCGC GGTAACGGCC TGCCCGACCG GCGTCGCCCA TACTTTTATG
GCGGCTGAAG CCATTGAAAC AGAAGCGAAA AAACGCGGCT GGTGGGTAAA AGTCGAAACG
CGCGGCTCCG TGGGGGCCGG CAATGCCATC ACCCCGGAAG AGGTGGCGGA AGCGGATTTA
GTGATTGTGG CGGCGGATAT CGAAGTGGAT CTGGCGAAGT TTGCCGGTCT CCCGATGTAC
CGCACGTCGA CCGGCCTGGC GCTGAAAAAG ACGGCGCAGG AGCTGGATAA AGCCGTAGCG
GAAGCGACGC CGTATCAACC GGCGGGTAAG GCATCGCAAG CGGCGACCGA AGGGAAGAAA
GAGAGCGCTG GCGCATACCG GCATCTGTTG ACGGGCGTTT CTTACATGCT GCCTATGGTG
GTTGCCGGGG GACTGTGTAT TGCGCTTTCC TTCGCCTTTG GTATTGAAGC CTTTAAGGTG
CCGGACACGC TGGCGGCGGC GCTGATGCAG ATTGGCGGCG GTTCGGCGTT TGCGCTGATG
GTGCCGGTAC TGGCGGGTTA TATCGCTTTC TCCATCGCGG ATCGCCCAGG CCTTACGCCA
GGTCTGATTG GCGGTATGCT GGCGGTTAGC ACCGGTTCTG GTTTTATCGG CGGGATCATT
GCCGGCTTCC TTGCCGGGTA TATGGCGAAG CTTATCAGTA CCAAACTGAA ACTTCCGCAA
AGTATGGAAG CGCTGAAGCC AATCCTGATC ATCCCGTTAA TTTCCAGTCT GGTGGTGGGG
CTGGCGATGA TTTACCTGAT CGGTAAACCG GTTGCCGGGA TTCTGGAAGG GCTCACCCAC
TGGCTGCAAA CCATGGGGAC CGCAAACGCG GTGCTGCTGG GCGCGATTCT CGGCGGGATG
ATGTGTACCG ACATGGGTGG CCCGGTGAAC AAAGCGGCGT ATGCGTTTGG CGTTGGTCTG
CTGAGTACGC AAACTTACGC GCCGATGGCG GCGATCATGG CCGCAGGTAT GGTACCGCCG
TTAGCGCTGG GTCTGGCAAC GATGGTGGCG CGTCGTAAGT TCGACAAAGC GCAGCAGGAA
GGCGGTAAAG CGGCGTTGGT ACTGGGGCTG TGCTTTATCA CTGAAGGCGC TATTCCGTTT
GCGGCGCGCG ACCCGATGCG TGTACTGCCG TGCTGTATCG TTGGCGGCGC GTTGACCGGG
GCTATTTCTA TGGCGGTAGG CGCAAAATTG ATGGCGCCGC ATGGCGGTCT GTTTGTTCTG
CTTATCCCAG GCGCAATTAC GCCGGTATTG GGATACCTGC TGGCAATTGT GGCCGGTACG
CTGGTGGCAG GACTGGCTTA TGCCGTCCTG AAACGTCCGG AGACGGAAGT CGCGGCAAAA
GCGGCATAA
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| Protein sequence | MKTLLIIDAN LGQARAYMAK TLLGAAAHKA NLEIIDNPND AELAIVLGES LPNDNALNGK
KVWLGDIGRA VAHPELFLSE AKSHATLYSA PAAAAPAASG GPKRVVAVTA CPTGVAHTFM
AAEAIETEAK KRGWWVKVET RGSVGAGNAI TPEEVAEADL VIVAADIEVD LAKFAGLPMY
RTSTGLALKK TAQELDKAVA EATPYQPAGK ASQAATEGKK ESAGAYRHLL TGVSYMLPMV
VAGGLCIALS FAFGIEAFKV PDTLAAALMQ IGGGSAFALM VPVLAGYIAF SIADRPGLTP
GLIGGMLAVS TGSGFIGGII AGFLAGYMAK LISTKLKLPQ SMEALKPILI IPLISSLVVG
LAMIYLIGKP VAGILEGLTH WLQTMGTANA VLLGAILGGM MCTDMGGPVN KAAYAFGVGL
LSTQTYAPMA AIMAAGMVPP LALGLATMVA RRKFDKAQQE GGKAALVLGL CFITEGAIPF
AARDPMRVLP CCIVGGALTG AISMAVGAKL MAPHGGLFVL LIPGAITPVL GYLLAIVAGT
LVAGLAYAVL KRPETEVAAK AA
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