Gene SeD_A2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2549 
Symbol 
ID6874745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2429414 
End bp2430883 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content53% 
IMG OID642785624 
Productlysine transporter 
Protein accessionYP_002216282 
Protein GI198245922 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0833] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00163669 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTTCCA AAACTAAAAC CACAGAAGCG CCCGCGCTAC GTCGCGAATT AAAGGCGCGT 
CACCTGACGA TGATTGCCAT TGGCGGCTCC ATCGGGACAG GTCTTTTCGT TGCATCTGGT 
GCGACAATTT CTCAGGCGGG GCCAGGCGGC GCGCTGTTTT CTTATATTCT GATTGGTTTG 
ATGGTCTACT TCCTGATGAC CAGTCTTGGC GAGCTGGCGG CCTATATGCC AGTATCTGGC 
TCGTTTGCGA CATATGGTCA GAACTATGTG GAAGAAGGCT TTGGTTTCGC GCTGGGCTGG 
AACTACTGGT ACAACTGGGC GGTGACTATC GCTGTTGACC TGGTTGCCGC GCAATTGGTG 
ATGGGCTGGT GGTTCCCGGA CACGCCGGGC TGGATCTGGA GCGCGCTATT CCTCTGCGTC 
ATTTTCTTGC TGAACTACAT TTCTGTACGC GGTTTTGGCG AGGCGGAGTA CTGGTTCTCG 
TTAATTAAAG TCGCGACCGT TATTATCTTC ATCATCGTTG GCGTAGCGAT GATTATCGGC 
ATTTTTAAAG GTGTCGAGCC GGTCGGCTGG AGCAACTGGA CGACGGGCGA TGCGCCTTTC 
GCTGGCGGTT TTGCGGCAAT GATTGGCGTC GCGATGATCG TGGGCTTCTC TTTCCAGGGA 
ACTGAGCTGA TTGGTATTGC CGCCGGGGAA TCTGAAAACC CGGAGAAGAA TATTCCACGC 
GCGGTGCGTC AGGTGTTCTG GCGTATTCTG CTGTTTTATG TTTTCGCGAT TTTGATTATC 
AGCCTGATCA TTCCTTATAC CGATCCAAAC CTGCTGCGTA ACGACGTCAA AGACATTAGC 
GTCAGTCCGT TTACCTTAGT GTTCCAGCAT GCGGGCTTGT TGTCTGCGGC GGCGATAATG 
AATGCGGTTA TCCTGACGGC GGTACTGTCT GCGGGTAACT CCGGGATGTA TGCCTCGACC 
CGTATGCTCT ACACCCTGGC CTGTGACGGT AAGGCCCCGC GTATTTTTGC GAAATTGTCC 
CGCGGCGGCG TACCGCGCAA TGCGCTTTAT GCCACCACCG TGATTGCCGG TCTTTGCTTT 
TTGACCTCAA TGTTTGGCAA CCAGACGGTC TATCTGTGGC TGTTGAACAC CTCCGGTATG 
ACGGGCTTCA TCGCCTGGCT GGGGATTGCC ATTAGCCATT ATCGCTTCCG TCGCGGTTAC 
GTGTTACAAG GGTATGATGT GAATGATTTG CCGTACCGTT CCGGGTTCTT CCCGCTGGGG 
CCGATTTTCG CCTTTGTACT GTGCCTGATT ATTACGTTGG GGCAGAACTA TGAAGCGTTC 
CTGAAAGATA CCATCGACTG GGGCGGCGTC GCGGCGACCT ATATCGGTAT TCCGCTGTTC 
CTGCTTATCT GGTTCGGCTA CAAGCTGATA AAAGGTACGC ATTTCGTGCG CTATAGCGAA 
ATGCACTTCC CGGAACGCGT TAAAAAGTAA
 
Protein sequence
MGSKTKTTEA PALRRELKAR HLTMIAIGGS IGTGLFVASG ATISQAGPGG ALFSYILIGL 
MVYFLMTSLG ELAAYMPVSG SFATYGQNYV EEGFGFALGW NYWYNWAVTI AVDLVAAQLV 
MGWWFPDTPG WIWSALFLCV IFLLNYISVR GFGEAEYWFS LIKVATVIIF IIVGVAMIIG 
IFKGVEPVGW SNWTTGDAPF AGGFAAMIGV AMIVGFSFQG TELIGIAAGE SENPEKNIPR 
AVRQVFWRIL LFYVFAILII SLIIPYTDPN LLRNDVKDIS VSPFTLVFQH AGLLSAAAIM 
NAVILTAVLS AGNSGMYAST RMLYTLACDG KAPRIFAKLS RGGVPRNALY ATTVIAGLCF 
LTSMFGNQTV YLWLLNTSGM TGFIAWLGIA ISHYRFRRGY VLQGYDVNDL PYRSGFFPLG 
PIFAFVLCLI ITLGQNYEAF LKDTIDWGGV AATYIGIPLF LLIWFGYKLI KGTHFVRYSE 
MHFPERVKK