Gene SeD_A2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2541 
Symbol 
ID6873647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2419810 
End bp2420952 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content55% 
IMG OID642785616 
Producthypothetical protein 
Protein accessionYP_002216274 
Protein GI198245878 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0379465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.156144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTA ATGTCACGCT GGATTTTGTA CGTGGCGTCG CTATCCTCGG TATCCTGCTT 
CTTAACATTA GCGCCTTTGG ATTGCCGAAG GCGGCTTATC TCAATCCCGC CTGGTACGGC 
GCGATCGTTC CCGAAGACGC CTGGTCCTGG GCGATTCTCG ATATTGTGGC GCAGGCTAAG 
TTTCTTACGC TGTTCGCGTT GTTGTTTGGC GCGGGGCTAC AAATGCTGCT TCCGCGTGGT 
AAACAGTGGA TTCAGTCGCG CTTAACGCTA TTGGTACTGT TAGGTTTTAT CCATGCGTTA 
TTCTTTTGGG ACGGCGACAT TCTGCTGGCC TACGGTCTGG TCGGGTTAAT TTGCTGGCGA 
CTGATACGCG ATGCGCCTTC GGTAAAAAGC CTGTTCAATA CCGGCATACT CCTTTATCTG 
GTAGGGATTG GCGTGCTACT GCTACTGGGC GTGGTATCGA GTAGCGAAAC CAGCCGCGCC 
TGGACGCCGG ATGCGTCGGC AATATTGTAT GAAAAATACT GGAAGCTGAA CGGCGGCATG 
GAGGCTATCA GCAACCGGGC AGAGATGCTG TCGAATAGTT TACTGGCGCT CGGCGCGCAG 
TATGGCTGGC AACTGGCGGG TATGATGCTG CTGGGCGCCG CGCTAATGCG TAGCGGCTGG 
CTGAAAGGTC AGTACAGTCT GCGGCACTAT CGCCGTACCG GGGCTCTGCT GGTGGCGTTA 
GGGCTACTGA TCAACCTGCC TGCGGTCATT TTACAATGGC GGCTGGACTG GGCGTACCGC 
TGGTGCGCCT TTTTATTGCA GGCGCCGCGT GAACTGAGCG CGCCGTTGCA AACGCTGGGC 
TATGCCGCGC TGATGTTTGG CTTCTGGCCG CAGCTTAGCC GATGCAGACT GACGCTTGCC 
ATTGCCTGCG TAGGGCGAAT GGCGCTGACC AATTATCTGC TGCAGACGAT CATCTGTACC 
ACGCTGTTTT ATCAGTTTGG CTTATTTATG AAATTCAATC GACTGGAACT CTTGTTCTTT 
GTCGTTCCGG TATGGGCAAT AAACCTTCTC TTTTCCGTCA TCTGGCTACG TTTCTGGCGA 
CAGGGACCGG TCGAGTGGTT ATGGCGTCAA CTCACGTTGC GCGCGTCAGG ATCGCTCAGA 
TAA
 
Protein sequence
MERNVTLDFV RGVAILGILL LNISAFGLPK AAYLNPAWYG AIVPEDAWSW AILDIVAQAK 
FLTLFALLFG AGLQMLLPRG KQWIQSRLTL LVLLGFIHAL FFWDGDILLA YGLVGLICWR 
LIRDAPSVKS LFNTGILLYL VGIGVLLLLG VVSSSETSRA WTPDASAILY EKYWKLNGGM 
EAISNRAEML SNSLLALGAQ YGWQLAGMML LGAALMRSGW LKGQYSLRHY RRTGALLVAL 
GLLINLPAVI LQWRLDWAYR WCAFLLQAPR ELSAPLQTLG YAALMFGFWP QLSRCRLTLA 
IACVGRMALT NYLLQTIICT TLFYQFGLFM KFNRLELLFF VVPVWAINLL FSVIWLRFWR 
QGPVEWLWRQ LTLRASGSLR