Gene SeD_A2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2534 
Symbol 
ID6871719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2413173 
End bp2414408 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content51% 
IMG OID642785613 
Productdihydropyrimidine dehydrogenase 
Protein accessionYP_002216271 
Protein GI198241985 
COG category[C] Energy production and conversion
[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase
[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID[TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.666903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAA AAGATTTGTC TGTTACCTTT TGCGGCGTTA AGTTTCCCAA TCCGTTTTGT 
CTTTCTTCTT CTCCGGTAGG CAATTGTTAT GAGATGTGCG CCAAAGCCTA TGATACCGGC
TGGGGCGGGA TCGTTTTTAA AACCATTGGT TTTTTTATTG CCAACGAAGT CTCTCCACGT
TTTGACCACC TAACGAAAGA AGATACCGGT TTTATTGGTT TCAAAAACAT GGAGCAAATT
GCTGAGCATC CGCTGGAAGA GAATCTGGCC GCCATTCGAC GGCTAAAACA GGATTATCCG
GATAAGGTGC TGATTGCTTC CATCATGGGG GAAAATGAGC AGCAGTGGCA AGAACTGGCG
CGTCTGGTTG AAGAAGCCGG CGCGGATATG ATTGAGTGTA ACTTCTCTTG CCCGCAGATG
ACCTCGCACG CCATGGGAAG CGATGTAGGG CAAAGCCCGG AGCTGGTTGA AAAATACTGC
CGCGCCGTAA AACGCGGCTC ATCTTTGCCA ATGCTGGCGA AAATGACGCC GAATATTGGC
GATATGTGTG AAGTCGCGCT GGCCGCCAAA CGCGGCGGAG CCGACGGTAT CGCCACCATC
AACACCGTGA AATCCATTAC TAACATCGAC CTGAACCGCA AAATCGGGAT GCCGGTGGTT
AACGGTAAAT CCAGTATCTC CGGTTATTCA GGAAAAGCGG TGAAACCCAT TGCGCTGCGT
TTTATCCAGC AGTTGCGAAT GCACCCTGAA CTGCGCGATT TCCCGATTAG CGGTATCGGC
GGCATTGAAA CCTGGGAAGA CGCTGCCGAA TTTCTGCTGC TGGGCGCGGC GACCCTACAG
GTGACGACAG GCATTATGCA ATACGGTTAC CGCATTGTAG AAGATATGGC GAGCGGCCTC
AGCCACTATC TGGCCGATCA GGGATTTGCC TCATTACAGG AGATGATCGG GCTGGCGAAT
GGCAATATTA TCCCGGCGGA AGACCTGGAT CGCAGCTATA TCGTCTATCC GCGGATTAAT
CAGGAGAAAT GCGTCGGCTG CGGACGTTGC TATATCTCCT GCTATGACGG CGGTCATCAG
GCGATGGAGT GGGATGAACA CAGCCGCACG CCGCATTGCA ATACGGAAAA ATGCGTCGGT
TGTCTGCTGT GCGGTCATGT CTGCCCGGTC GCCTGTATTG ATTTAGGCGA GGTCAAATTT
AAAAAAGGCG AAAAAGAACA CGCGTTAACG CTGTAG
 
Protein sequence
MLTKDLSVTF CGVKFPNPFC LSSSPVGNCY EMCAKAYDTG WGGIVFKTIG FFIANEVSPR 
FDHLTKEDTG FIGFKNMEQI AEHPLEENLA AIRRLKQDYP DKVLIASIMG ENEQQWQELA
RLVEEAGADM IECNFSCPQM TSHAMGSDVG QSPELVEKYC RAVKRGSSLP MLAKMTPNIG
DMCEVALAAK RGGADGIATI NTVKSITNID LNRKIGMPVV NGKSSISGYS GKAVKPIALR
FIQQLRMHPE LRDFPISGIG GIETWEDAAE FLLLGAATLQ VTTGIMQYGY RIVEDMASGL
SHYLADQGFA SLQEMIGLAN GNIIPAEDLD RSYIVYPRIN QEKCVGCGRC YISCYDGGHQ
AMEWDEHSRT PHCNTEKCVG CLLCGHVCPV ACIDLGEVKF KKGEKEHALT L