Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2534 |
Symbol | |
ID | 6871719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2413173 |
End bp | 2414408 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642785613 |
Product | dihydropyrimidine dehydrogenase |
Protein accession | YP_002216271 |
Protein GI | 198241985 |
COG category | [C] Energy production and conversion [F] Nucleotide transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.666903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACAA AAGATTTGTC TGTTACCTTT TGCGGCGTTA AGTTTCCCAA TCCGTTTTGT CTTTCTTCTT CTCCGGTAGG CAATTGTTAT GAGATGTGCG CCAAAGCCTA TGATACCGGC TGGGGCGGGA TCGTTTTTAA AACCATTGGT TTTTTTATTG CCAACGAAGT CTCTCCACGT TTTGACCACC TAACGAAAGA AGATACCGGT TTTATTGGTT TCAAAAACAT GGAGCAAATT GCTGAGCATC CGCTGGAAGA GAATCTGGCC GCCATTCGAC GGCTAAAACA GGATTATCCG GATAAGGTGC TGATTGCTTC CATCATGGGG GAAAATGAGC AGCAGTGGCA AGAACTGGCG CGTCTGGTTG AAGAAGCCGG CGCGGATATG ATTGAGTGTA ACTTCTCTTG CCCGCAGATG ACCTCGCACG CCATGGGAAG CGATGTAGGG CAAAGCCCGG AGCTGGTTGA AAAATACTGC CGCGCCGTAA AACGCGGCTC ATCTTTGCCA ATGCTGGCGA AAATGACGCC GAATATTGGC GATATGTGTG AAGTCGCGCT GGCCGCCAAA CGCGGCGGAG CCGACGGTAT CGCCACCATC AACACCGTGA AATCCATTAC TAACATCGAC CTGAACCGCA AAATCGGGAT GCCGGTGGTT AACGGTAAAT CCAGTATCTC CGGTTATTCA GGAAAAGCGG TGAAACCCAT TGCGCTGCGT TTTATCCAGC AGTTGCGAAT GCACCCTGAA CTGCGCGATT TCCCGATTAG CGGTATCGGC GGCATTGAAA CCTGGGAAGA CGCTGCCGAA TTTCTGCTGC TGGGCGCGGC GACCCTACAG GTGACGACAG GCATTATGCA ATACGGTTAC CGCATTGTAG AAGATATGGC GAGCGGCCTC AGCCACTATC TGGCCGATCA GGGATTTGCC TCATTACAGG AGATGATCGG GCTGGCGAAT GGCAATATTA TCCCGGCGGA AGACCTGGAT CGCAGCTATA TCGTCTATCC GCGGATTAAT CAGGAGAAAT GCGTCGGCTG CGGACGTTGC TATATCTCCT GCTATGACGG CGGTCATCAG GCGATGGAGT GGGATGAACA CAGCCGCACG CCGCATTGCA ATACGGAAAA ATGCGTCGGT TGTCTGCTGT GCGGTCATGT CTGCCCGGTC GCCTGTATTG ATTTAGGCGA GGTCAAATTT AAAAAAGGCG AAAAAGAACA CGCGTTAACG CTGTAG
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Protein sequence | MLTKDLSVTF CGVKFPNPFC LSSSPVGNCY EMCAKAYDTG WGGIVFKTIG FFIANEVSPR FDHLTKEDTG FIGFKNMEQI AEHPLEENLA AIRRLKQDYP DKVLIASIMG ENEQQWQELA RLVEEAGADM IECNFSCPQM TSHAMGSDVG QSPELVEKYC RAVKRGSSLP MLAKMTPNIG DMCEVALAAK RGGADGIATI NTVKSITNID LNRKIGMPVV NGKSSISGYS GKAVKPIALR FIQQLRMHPE LRDFPISGIG GIETWEDAAE FLLLGAATLQ VTTGIMQYGY RIVEDMASGL SHYLADQGFA SLQEMIGLAN GNIIPAEDLD RSYIVYPRIN QEKCVGCGRC YISCYDGGHQ AMEWDEHSRT PHCNTEKCVG CLLCGHVCPV ACIDLGEVKF KKGEKEHALT L
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