Gene SeD_A2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2531 
Symbol 
ID6871272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2410772 
End bp2411491 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content52% 
IMG OID642785610 
Producthypothetical protein 
Protein accessionYP_002216268 
Protein GI198245373 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.379289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGC GCGTGTTTTA CAGCCTGTTG GTCCTGGTAG GCTTGCTGCT GTTGACGGTG 
CTTGGCCTCG ATCGGTGGAT GAGCTGGAAA ACAGCGCCCT ATATCTATGA CGAGCTACAG 
GATCTCCCCT ACCGCCAGGT TGGCGTCGTG TTAGGGACAG CCAAATACTA TCGCAAGGGT 
GTCATTAATC AGTACTATCG TTATCGTATC CAGGGCGCGT TAAACGCTTA CAATAGCGGT 
AAAGTCAATT ACCTGCTGCT CAGCGGCGAC AATGCCCTGC AAAGCTATAA CGAACCGATG 
ACCATGCGCA AAGACCTTAT CGCGGCGGGC GTCGATCCTG CGGACATTGT GCTTGATTAC 
GCTGGCTTCC GTACGCTTGA CTCCATTGTG CGTACCCGCA AAGTGTTTGA TACCAACGAC 
TTTATTATCA TCACTCAGCG CTTCCACTGC GAACGCGCCT TGTTTATTGC GTTGCATATG 
GGCATTCAGG CGCAGTGTTA CGCGGTACCT TCGCCCAAAA ATATGCTGAC AGTGCGCCTG 
CGCGAATTTG GCGCCCGCTT TAGCGCGCTG GCGGATCTCT ATATTTTTAA ACGCGAACCG 
CGTTTTTTAG GCCCGCTGGT ACCTATTCCC ACGCAGCATC AGGTGCCGAA TGACGCCCAG 
GGGTATCCGG CAGTTACGCC GGAACAATTG CTTGAACTGG AAAAGAAAAA AGGGAAATGA
 
Protein sequence
MLKRVFYSLL VLVGLLLLTV LGLDRWMSWK TAPYIYDELQ DLPYRQVGVV LGTAKYYRKG 
VINQYYRYRI QGALNAYNSG KVNYLLLSGD NALQSYNEPM TMRKDLIAAG VDPADIVLDY 
AGFRTLDSIV RTRKVFDTND FIIITQRFHC ERALFIALHM GIQAQCYAVP SPKNMLTVRL 
REFGARFSAL ADLYIFKREP RFLGPLVPIP TQHQVPNDAQ GYPAVTPEQL LELEKKKGK