| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2530 |
|---|
| Symbol | cdd |
|---|
| ID | 6875586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 2409711 |
|---|
| End bp | 2410595 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642785609 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_002216267 |
|---|
| Protein GI | 198242046 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCAC GTTTTCAAAC TGCTTTTGCC CAGCTTGCGG ATAATTTGCA ATCAGCGCTG
GCCCCTATCC TGGCGGACCA CCATTTTCCC GCCATGCTGA CCGCAGAGCA GGTCTCGACG
CTTAAAAATA CGGCGGGACT GGACGAAGAC GCGCTGGCTT TCGCACTGTT ACCTCTGGCG
GCGACCTGCG CCCGTACCGA TTTGTCCCAT TTTAACGTCG GCGCGATTGC GCGCGGCGTT
AGCGGCAACT GGTATTTCGG CGCGAATATG GAGTTCCTGG GCGCCACCAT GCAACAAACT
GTGCATGCTG AACAAAGCGC GATTAGCCAC GCCTGGCTAC GCGGCGAAAA AGGGCTCGCC
GCCGTCACCG TTAACTACAC GCCTTGCGGC CACTGTCGCC AGTTTATGAA CGAGCTGAAC
AGCGGTCTGG ATCTGCGCAT TCATCTGCCG GGCCGCGCGC CGCATACGTT ACGCGATTAT
CTGCCTGACG CTTTCGGGCC AAAAGATCTG GAGATCAAAA CGCTGCTGAT GGACGAGCAG
GATCATGGCT TTACGTTAAC GGGCGATACG CTAACGCAAG CGGCGATTAC GGCAGCCAAT
AAGAGCCATA TGCCTTATAG CCACTCACCG AGCGGCGTGG CGCTGGAATG TAAAGATGGC
CGTATTTTCA CCGGCAGCTA TGCGGAAAAC GCCGCCTTTA ACCCTACGCT TCCCCCGCTG
CAAGGCGCGC TAAACCTGCT GAGTCTCAAT GGCTATGACT ATGCGGATAT TCAGCGTGCG
ATTCTGGCGG AAAAAGGCGA TGCAGCATTA ATTCAATGGG ATGCCACCGC CGCAACGCTG
AAAGCGTTAG GTTGCCATAA TATTGACCGC GTGCTTCTCG GCTAA
|
|---|
| Protein sequence | MHPRFQTAFA QLADNLQSAL APILADHHFP AMLTAEQVST LKNTAGLDED ALAFALLPLA
ATCARTDLSH FNVGAIARGV SGNWYFGANM EFLGATMQQT VHAEQSAISH AWLRGEKGLA
AVTVNYTPCG HCRQFMNELN SGLDLRIHLP GRAPHTLRDY LPDAFGPKDL EIKTLLMDEQ
DHGFTLTGDT LTQAAITAAN KSHMPYSHSP SGVALECKDG RIFTGSYAEN AAFNPTLPPL
QGALNLLSLN GYDYADIQRA ILAEKGDAAL IQWDATAATL KALGCHNIDR VLLG
|
|---|
| |