Gene SeD_A2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2528 
Symbol 
ID6872503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2408467 
End bp2408865 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content46% 
IMG OID642785607 
Producthypothetical protein 
Protein accessionYP_002216265 
Protein GI198243846 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT CACTGAATAT TATCTGGCAA TATATACGCG CTTTTGTATT GATTTATGCC 
TGTTTGTATG CAGGCATTTT TCTTGCATCA CTGCTTCCTA TCACTATTCC CGGCAGCATT 
ATCGGGATGT TAATTCTGTT TGTATTGCTG GCGCTGCAAA TTCTGCCGGC AAAGTGGGTT 
AACCCCGGCT GTTATGTGCT GATTCGTTAT ATGGCGTTGC TGTTTGTGCC GATTGGCGTC 
GGGGTCATGC AATATTTTGA TTTACTGCGC GCGCAATTCG GCCCGGTGGT GGTCTCTTGC 
GCTATCAGTA CGCTGGTCGT TTTTGTGGTC GTAAGCTGGA GTTCACATCT GATACACGGT 
GAGCGTAAAG TGGTTGGGCA GAAGGGAACG AAAAAATGA
 
Protein sequence
MSKSLNIIWQ YIRAFVLIYA CLYAGIFLAS LLPITIPGSI IGMLILFVLL ALQILPAKWV 
NPGCYVLIRY MALLFVPIGV GVMQYFDLLR AQFGPVVVSC AISTLVVFVV VSWSSHLIHG 
ERKVVGQKGT KK