| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2525 |
|---|
| Symbol | gtdA |
|---|
| ID | 6873092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2404894 |
|---|
| End bp | 2405931 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642785605 |
|---|
| Product | gentisate 1,2-dioxygenase |
|---|
| Protein accession | YP_002216263 |
|---|
| Protein GI | 198243492 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
|---|
| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TAAATCAGAA CGTAAAAGAT AGCCGTCAGC AGTATTACCA GCATATTTCC
GGGCAGAATC TGACGCCGCT GTGGGAATCG TTACATCACC TGGTACCGCA GACGCCAAAC
GCCAACTGCG CGCCGGCCTA CTGGAATTAT CAGGAAATTC GTCCGCTACT GATGGAAAGC
GGCAATGTCA TTGGCGCGAA AGAGGCGATC CGCCGGGTGC TGGTGCTGGA AAATCCGGCA
TTGCGCGGTC AGTCGTCGAT CACGGCGACC TTATACGCTG GTTTACAGCT GATCCTGCCC
GGCGAAGTCG CGCCGAGTCA TCGCCATAAC CAGTCGGCGC TGCGTTTTAT CGTCGAAGGT
AAAGGCGCAT TTACCGCGGT GGACGGCGAG CGCACGCCAA TGCATACCGG CGATTTTATC
CTGACGCCGC AGTGGCGCTG GCACGATCAT GGTAATCCGG GGTCAGAGCC GGTGGTATGG
CTGGATGGTC TGGATCTGCC GTTAGTCAAT CTCCTGGGCT GTGGTTTTGC GGAAGACTAT
CCCGAAGATC AGCAGCCGGT GACGCGAAAA GAGGGCGATT ATCTGCCGCG CTATGCAGCG
AATATGCTGC CGCTGCGCCA CCAGCGCGGG AACTCGTCGC CGATTTTCAA CTACCGTTAC
GACCGCAGTC GCGAGGCGCT GCACGATCTG ACCCGTATGG GCGATCCGGA TGAGTGGGAA
GGTTACAAGC TGCGTTACGT TAATCCCGTC ACCGGCGGTT ATCCGATGCC GTCGATGGGC
GCGTTCCTGC AACTGTTGCC AAAAGGCTTT GCCTCGCGTG TGGCGCGGAG CACCGACAGC
ACTATCTACC ACGTCGTTGA AGGGGCAGGG CTGGTCACTA TCGGCAACGA AACTTTTCAT
TTTTCCGCAA AAGACATTTT TGTGGCGCCG ACCTGGCATG AGGTGTCGTT TCGCAGCAGC
GAAGACACGG TGTTATTCAG CTTTTCGGAC AAGCCGGTTC AGGAAGCCCT GGGGCTGTTC
CGCGAAGCAC GTTATTAA
|
|---|
| Protein sequence | MSEINQNVKD SRQQYYQHIS GQNLTPLWES LHHLVPQTPN ANCAPAYWNY QEIRPLLMES
GNVIGAKEAI RRVLVLENPA LRGQSSITAT LYAGLQLILP GEVAPSHRHN QSALRFIVEG
KGAFTAVDGE RTPMHTGDFI LTPQWRWHDH GNPGSEPVVW LDGLDLPLVN LLGCGFAEDY
PEDQQPVTRK EGDYLPRYAA NMLPLRHQRG NSSPIFNYRY DRSREALHDL TRMGDPDEWE
GYKLRYVNPV TGGYPMPSMG AFLQLLPKGF ASRVARSTDS TIYHVVEGAG LVTIGNETFH
FSAKDIFVAP TWHEVSFRSS EDTVLFSFSD KPVQEALGLF REARY
|
|---|
| |