Gene SeD_A2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2524 
Symbol 
ID6872675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2404177 
End bp2404878 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content54% 
IMG OID642785604 
Productfumarylacetoacetate hydrolase family protein 
Protein accessionYP_002216262 
Protein GI198243751 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT ATGTATTCCA GCCGCAGGCC CCGGTAACAG TACCCGTGGC GGGCAGTGAT 
GAGCAGTTTC CGGTACGTCG CGTTTACTGC GTGGGTCGCA ACTATGCCGC CCATGCCCGT
GAAATGGGCT TTGATCCCGA TCGCGAACCG CCGTTCTTCT TTTGTAAACC AGCGGACGCT
GTCGTCCCGG TAGCGGCGGG GGATACCCTG GAACTGCCGT ATCCGGCGCA GACCGATAAC
TACCATTATG AAATTGAGCT GGTGGTGGCG ATTGGTAAAA AGGGGAGCGA TATCCCGCTG
GAAAAAGCCC ATGAATATGT CTGGGGATAC GCCACCGGTC TGGACATGAC GCGTCGCGAT
CGTCAGATGG AAATGCGCCA GATGGGACGC CCGTGGGAAA TTGGCAAAGC GTTCGATCTC
TCCGCGCCCA TTGCGCCATT ACACAAAGCC GCTGAAACGC ATAATGTGGA TAACGCCCCT
ATTTGGCTAC AGGTTAACGG CGAAGACCAT CAGCGCAGCG ATATTCGTCA TCTTATTTGG
TCGGTAAATG AAACCATCAG CTATTTGTCC GGCTTCTTTG AATTGCAGCC AGGCGATTTA
ATTTTCACCG GTACGCCAGA GGGGGTGGGC GCAGTGGTGA AAGGGGATGT CATCACCGGG
AACGTAGAAG GTCTGACGCC GATTGCTGTG AAAATTGTCT GA
 
Protein sequence
MTKYVFQPQA PVTVPVAGSD EQFPVRRVYC VGRNYAAHAR EMGFDPDREP PFFFCKPADA 
VVPVAAGDTL ELPYPAQTDN YHYEIELVVA IGKKGSDIPL EKAHEYVWGY ATGLDMTRRD
RQMEMRQMGR PWEIGKAFDL SAPIAPLHKA AETHNVDNAP IWLQVNGEDH QRSDIRHLIW
SVNETISYLS GFFELQPGDL IFTGTPEGVG AVVKGDVITG NVEGLTPIAV KIV