Gene SeD_A2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2513 
Symbol 
ID6875142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2394281 
End bp2396011 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content54% 
IMG OID642785593 
ProductD-lactate dehydrogenase 
Protein accessionYP_002216251 
Protein GI198243620 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.730423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA TAACAATGAC TGATAATAAA ACGTTCCTGA ATGAGCTGGC CCGCCTGGTA 
GGCCATTCTC ACCTGCTGAC AGACCCCGCC AAAACCGCCC GCTATCGCAA GGGTTTCCGT
TCCGGTCAGG GCGACGCGCT GGCCGTTGTT TTCCCGGGTT CATTACTGGA ACTGTGGCGT
GTGCTCAACG CCTGCGTTAA CGCTGACAAA ATTATTCTGA TGCAGGCCGC CAACACCGGT
CTGACGGAAG GCTCCACGCC GAACGGCAAC GACTACGATC GCGATATTGT GATTATCAGC
ACCCAGCGGC TGGATAAGCT GCACTTACTG GATAACGGCC AACAGGTTCT GGCCTGGCCC
GGTACGACGC TCTATGCGCT GGAAAAAGCG CTTAAACCGC TGGGCCGTGA ACCGCACTCG
GTGATTGGTT CGTCGTGTAT CGGCGCGTCG GTCATCGGCG GTATCTGTAA TAACTCCGGC
GGCTCGCTGG TGCAGCGCGG CCCGGCCTAT ACCGAGATGT CGCTCTTTGC CCGTATTGAC
GAGCAAGGCA AACTGCAACT GGTCAATCAT CTGGGTATCG ATCTTGGGCA TACGCCGGAG
CAGATCCTGA GCAAGCTGGA TGACGAACGG ATTAAAGATG AGGATGTGCG CCACGATGGT
CGTCATGCGC ACGATCACGA CTACGTGACG CGGGTACGAG ATATCAACGC CGATACGCCC
GCCCGCTATA ACGCCGACCC GGACCGTTTG TTTGAATCTT CCGGCTGCGC CGGAAAACTG
GCGGTTTTTG CCGTTCGCCT TGATACCTTT GCAGCGGAAA AAAATCAGCA GGTTTTTTAT
ATCGGCACCA ATCAGCCCGC GGTACTGACT GAAATCCGTC GGCATATTCT GGCGAACTTC
GACAATCTGC CAGTGGCGGG AGAATATATG CATCGCGATA TCTACGATAT TGCGGAGCAG
TACGGTAAAG ATACCTTTCT GATGATCGAT AAACTCGGCA CCGACAAGAT GCCATTCTTT
TTCACGCTAA AAGGCCGAAC CGATGCGATG CTGGAAAAAG TAAAATTTTT CCGTCCGCAT
TTCACCGACC GCGCGATGCA GAAATTCGGC CATCTGTTTC CCAGCCATCT GCCGCCACGA
ATGAAAAACT GGCGCGATAA ATATGAGCAT CATCTGCTGT TAAAAATGGC GGGAGACGGC
GTCGCAGAAG CGCAACGCTG GCTGAATGAA TTTTTTAAAT CCGCTGAGGG CGGTTTCTTC
ACCTGTACGC CGGAAGAAGG CAGCAAAGCC TTCCTGCACC GCTTCGCCGC TGCTGGCGCG
GCGATTCGTT ATCAGGCCGT ACACGCTGAT GAAGTGGAAG ATATCCTGGC GCTGGATATC
GCTCTGCGCC GCAACGATAC CGACTGGTTC GAGCATCTGC CGCCGGAAAT CGACAGCCAA
CTGGTACATA AACTCTATTA CGGCCACTTT ATGTGCCACG TTTTTCATCA GGACTATATC
GTGAAGAAAG GCGTCGACGT CCACGCGCTG AAAGCGCAAA TGCTGGAGCT GTTGCAGGCG
CGCGGGGCAC AATACCCGGC GGAGCACAAC GTTGGACATC TGTATAAAGC GCCGGAAACG
CTGACGCGTT TTTATCGGCA AAATGACCCA ACCAACAGTA TGAACCCCGG TATCGGCAAA
ACGAGTAAGC GGAAATTCTG GCAGGAAAAT ACGCCCGACG AAACGCATTA A
 
Protein sequence
MSSITMTDNK TFLNELARLV GHSHLLTDPA KTARYRKGFR SGQGDALAVV FPGSLLELWR 
VLNACVNADK IILMQAANTG LTEGSTPNGN DYDRDIVIIS TQRLDKLHLL DNGQQVLAWP
GTTLYALEKA LKPLGREPHS VIGSSCIGAS VIGGICNNSG GSLVQRGPAY TEMSLFARID
EQGKLQLVNH LGIDLGHTPE QILSKLDDER IKDEDVRHDG RHAHDHDYVT RVRDINADTP
ARYNADPDRL FESSGCAGKL AVFAVRLDTF AAEKNQQVFY IGTNQPAVLT EIRRHILANF
DNLPVAGEYM HRDIYDIAEQ YGKDTFLMID KLGTDKMPFF FTLKGRTDAM LEKVKFFRPH
FTDRAMQKFG HLFPSHLPPR MKNWRDKYEH HLLLKMAGDG VAEAQRWLNE FFKSAEGGFF
TCTPEEGSKA FLHRFAAAGA AIRYQAVHAD EVEDILALDI ALRRNDTDWF EHLPPEIDSQ
LVHKLYYGHF MCHVFHQDYI VKKGVDVHAL KAQMLELLQA RGAQYPAEHN VGHLYKAPET
LTRFYRQNDP TNSMNPGIGK TSKRKFWQEN TPDETH