Gene SeD_A2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2511 
Symbol 
ID6871593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2390619 
End bp2391536 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content55% 
IMG OID642785591 
Productamine ABC transporter periplasmic amine-binding protein 
Protein accessionYP_002216249 
Protein GI198244896 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT CAAAGCTATG GGTAAGTTCG CTGGCGTTGC TGGCGACGGT GAGTTTACCT 
CTACAGGCGG CATCGCCCGT GACGGTCGGG TCAAAGATTG ATACCGAAGG CGCGCTGCTC
GGCAACATGA TTTTGCAGGT ACTGGAAAGC CACGGCGTTA AAACGGTCAA TAAAATTCAG
CTCGGGACGA CGCCAGTCGT TCGTGGCGCG ATTACCGCCG GAGAGCTGGA TATCTATCCG
GAATACACCG GTAACGGGGC GTTCTTTTTT AAAGATGAAA ACGATCCGGC ATGGAAAAAT
GCAAAGCAAG GCTTTGAGAA AGTCAAAAAA CTGGATGCGG AGCAGAATAA GCTGGTCTGG
TTGACGCCTG CGCCGGCCAA CAACACCTGG ACCATCGCGA TACGTCAGGA CATCGCGGAA
AAAAATAAAC TCTCCTCGCT TGCCGATCTC AGCCGTTATC TGAAAGAGGG CGGCACTTTT
AAACTGGCGG CGTCTGCGGA ATTTATCGAA CGGGCGGATG CGCTGCCGGC ATTTGAAAAA
GCCTATGATT TTACCTTGAA TCAGAACCAG CTCTTGTCGC TGGCGGGCGG CGATACGGCG
GTCACGATCA AAGCCGCCGC GCAACAAACA TCCGGTGTTA ACGCCGCGAT GGCGTATGGC
ACCGACGGCC CGGTCGCCGC GCTGGGTCTG CAAACCCTGA GCGACCCGAA AGGCGTCCAG
CCTATCTATG CCCCCGCGCC GGTAGTGCGT GAATCGGTGT TACAGGCCTA TCCGCAGATA
GCCGATTGGC TGCAGCCCGT TTTCGCCAGC CTTGATGAGA AAACGCTGCA ACAGTTGAAC
GCCAGAATCG CCGTAGAAGG GCTGGATGCG AAAAAAGTCG CCGCAGATTA CCTCCGACAA
AAAGGGTGGG TGAAGTAA
 
Protein sequence
MTISKLWVSS LALLATVSLP LQAASPVTVG SKIDTEGALL GNMILQVLES HGVKTVNKIQ 
LGTTPVVRGA ITAGELDIYP EYTGNGAFFF KDENDPAWKN AKQGFEKVKK LDAEQNKLVW
LTPAPANNTW TIAIRQDIAE KNKLSSLADL SRYLKEGGTF KLAASAEFIE RADALPAFEK
AYDFTLNQNQ LLSLAGGDTA VTIKAAAQQT SGVNAAMAYG TDGPVAALGL QTLSDPKGVQ
PIYAPAPVVR ESVLQAYPQI ADWLQPVFAS LDEKTLQQLN ARIAVEGLDA KKVAADYLRQ
KGWVK