Gene SeD_A2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2510 
Symbol 
ID6871073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2389446 
End bp2390615 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content59% 
IMG OID642785590 
Productinner membrane ABC transporter permease YehY 
Protein accessionYP_002216248 
Protein GI198242348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.579969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACG CTGCCAAAAA AATTACGGTT AATCGTGTGC TGTTGCTGTT GGTTGTTCTG 
GCCCTGCTTG CTGTCGCGCT GCCTTTCATT AATTACGCCC CGAATCGTCT GGTGAGCGGC
GAGGGGCGCC AGTTATGGGA GATCTGGCCG GCGACCATCT GGATGCTGAC TGGCGCGGGA
TGCGCGCTGT TTACGCTGTG CTTTGTGCCC GGTAAACGCG GTAGCGTACT GACGCTGATG
ATGGCGCAGA CGCTTTTTAT TGTCATGCTG TGGGGAGTCG GCAGGGCGGC GACCCAGTTG
GCGCAGGAGG GCAGTCCGCT GGCGCGTACC AGTCTGGGAA GTGGATTGTG GCTGGGCCTC
GGTCTGATGC TGCTGGCCTG TAGCGATGCG ATCCGCCGTA TTACCGTTGG GCCGCTGTGG
CGCTGGTTGC TGCACGCGCA AATTGTTATT GTCCCGCTGG CGCTGCTGTT TTCAGGCACG
TTCGACAACC TCTCGCTTCT GAAAGAGTAT ACCAACCGCC AGGATGTTTT CGATGCCGCG
CTGGTGCAAC ATTTAATGTT ACTGGCGGGC ACGGTGCTGC CGGCGCTGGC GATCGGACTA
CCGTTGGGCG TCTGGTGTTA TTTTTCCGCC TCACGCCAGG GGCCGGTGTT TACCGTACTG
AATGTGATCC AGACTATTCC TTCCGTCGCG CTGTTTGGCC TGCTGATCGC GCCGTTGGCC
GGGCTGGAGA AACAGTTTCC GTGGCTTGCC GAATTCGGCG TCGCGGGAAC CGGCATGACG
CCTGCGCTGA TAGCGCTGGT GCTCTATGCG TTATTGCCGC TGGTGCGCGG CGTGGTCGCC
GGGCTCAATC AGGTGCCACG CGATGTGCTG GAGAGCGCAA GAGCAATGGG AATGAGTAGC
GGCCAGCGCT TCAGGCATGT GCAACTGCCG CTGGCGCTGC CGGTCTTTTT ACGTAGCCTG
CGGGTAGTAA TGGTCCAGAC AGTGGGAATG GCCGTCGTCG CCGCGCTGAT TGGCGCGGGA
GGTTTCGGCG CGCTGGTGTT TCAGGGGCTA TTGAGCAGCG CCATTGATTT AGTCCTGTTG
GGCGTCATTC CGGTGATTGC GCTGGCGGTA GTGATCGACG CGCTGTTTGA TTTATGGATC
GCGTTTTTGA AGGGAGCAAC CGATGATTGA
 
Protein sequence
MSDAAKKITV NRVLLLLVVL ALLAVALPFI NYAPNRLVSG EGRQLWEIWP ATIWMLTGAG 
CALFTLCFVP GKRGSVLTLM MAQTLFIVML WGVGRAATQL AQEGSPLART SLGSGLWLGL
GLMLLACSDA IRRITVGPLW RWLLHAQIVI VPLALLFSGT FDNLSLLKEY TNRQDVFDAA
LVQHLMLLAG TVLPALAIGL PLGVWCYFSA SRQGPVFTVL NVIQTIPSVA LFGLLIAPLA
GLEKQFPWLA EFGVAGTGMT PALIALVLYA LLPLVRGVVA GLNQVPRDVL ESARAMGMSS
GQRFRHVQLP LALPVFLRSL RVVMVQTVGM AVVAALIGAG GFGALVFQGL LSSAIDLVLL
GVIPVIALAV VIDALFDLWI AFLKGATDD