Gene SeD_A2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2506 
Symbol 
ID6873698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2385004 
End bp2386689 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content53% 
IMG OID642785586 
Productsensor histidine kinase 
Protein accessionYP_002216244 
Protein GI198243117 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAGT TTAATCTGGT GTTGCTGCTG CTTCAGCAGA TGTGCGTGTT TCTGGTCATT 
GCGTGGCTAA TGAGTAAAAC GCGCTTGTTC ATCCCGCTTA TGCAGGTCAC GGTTCGTCTG
CCGCACAAGC TTCTGTGTTA CGTCACGTTT TCTATCTTCT GCATTATGGG CACTTATTTT
GGGCTACATA TCGAAGATTC GATTGCCAAT ACCCGCGCGA TTGGCGCGGT GATGGGTGGC
CTACTCGGCG GGCCGGTCGT CGGCGGGCTG GTCGGCCTGA CCGGTGGGTT ACATCGGTAT
TCTATGGGCG GCATGACGGC GCTGAGCTGT ATGATTTCCA CCATCGTCGA AGGGCTGCTG
GGAGGGTTGG TACACAGCGT TCTCATACGT CGCGGACGCC CGGACAAAGT GTTTAGCCCG
CTGACGGCGG GAGCAATTAC GTGTGTTGCC GAACTGGTGC AGATGCTGAT CATTTTACTG
ATAGCCAGGC CGTTTGACGA TGCCCTGCAT CTGGTCAGTA ATATTGCCGC GCCGATGATG
GTGACGAATA CCGTTGGCGC CGCGCTGTTC ATGCGTATTT TGCTCGATAA GCGCGCCATG
TTCGAAAAAT ATACTTCGGC ATTTTCTGCT ACCGCGCTGA AGGTCGCCGC GTCAACGGAG
GGGATTCTGC GTCAGGGATT TAACGAAGTG AACAGTATGA AGGTGGCGCA GGTGTTATAT
CAGGAGCTGG ATATTGGCGC CGTCGCCATC ACCGATCGTG AAAAACTGCT GGCTTTTACT
GGTATTGGCG ACGATCACCA TCTACCGGGC AAACCCATTT CATCAGGTTA TACGCTGAAA
GCGATTGAAA CCGGAGAGGT GGTTTATGCC GATGGCAACG AAGTGCCGTA CCGCTGTTCG
CTACACCCGC AGTGTAAACT CGGCTCGACG CTGGTGATCC CGCTGCGTGG CGAAAATCAG
CGAGTCATGG GCACCATTAA ATTGTACGAA GCGAAAAACC GACTATTCAG CTCAATTAAT
CGCACCCTGG GAGAGGGGAT TGCGCAGCTT TTATCCGCGC AGATCCTGGC CGGGCAGGAT
GAACGGCAGA AGGCGTTGCT GACGCAGTCA GAGATCAAGC TGTTGCACGC GCAGGTGAAT
CCGCATTTTC TGTTTAACGC GCTCAATACC ATTAAAGCGG TGATTCGTCG CGACAGCGAA
CAGGCCAGCC AACTGGTGCA GTACTTGTCG ACCTTTTTTC GCAAAAATTT AAAACGCCCG
TCGGAAATCG TCACGCTGGC GGATGAAATT GAACACGTGA ACGCTTATCT GCAAATTGAA
AAAGCGCGTT TTCAGTCGCG TCTGCAGGTA CAGCTTGATG TTCCATCGAC GCTTTCACGT
CAGAAATTGC CTGCGTTTAC ATTACAGCCG ATTGTTGAGA ACGCCATTAA ACATGGCACG
TCGCAACTGC TTGATACCGG CAACGTCGCT ATTCGCGCCC GGCGCGAAGG GCAGCATTTG
ATGTTAGATA TTGAAGATAA TGCGGGACTG TATCAGCCTT CCGCCGGCAG TAGCGGGCTG
GGGATGAGTC TGGTTGATAA ACGTCTGCGC GAACACTTTG GCGATGATTA TGGTATTAGC
GTGGCCTGCG AGCCGGACTG TTTTACCCGA ATTACATTAC GACTTCCACT GGAGGAGGAC
GCATGA
 
Protein sequence
MYEFNLVLLL LQQMCVFLVI AWLMSKTRLF IPLMQVTVRL PHKLLCYVTF SIFCIMGTYF 
GLHIEDSIAN TRAIGAVMGG LLGGPVVGGL VGLTGGLHRY SMGGMTALSC MISTIVEGLL
GGLVHSVLIR RGRPDKVFSP LTAGAITCVA ELVQMLIILL IARPFDDALH LVSNIAAPMM
VTNTVGAALF MRILLDKRAM FEKYTSAFSA TALKVAASTE GILRQGFNEV NSMKVAQVLY
QELDIGAVAI TDREKLLAFT GIGDDHHLPG KPISSGYTLK AIETGEVVYA DGNEVPYRCS
LHPQCKLGST LVIPLRGENQ RVMGTIKLYE AKNRLFSSIN RTLGEGIAQL LSAQILAGQD
ERQKALLTQS EIKLLHAQVN PHFLFNALNT IKAVIRRDSE QASQLVQYLS TFFRKNLKRP
SEIVTLADEI EHVNAYLQIE KARFQSRLQV QLDVPSTLSR QKLPAFTLQP IVENAIKHGT
SQLLDTGNVA IRARREGQHL MLDIEDNAGL YQPSAGSSGL GMSLVDKRLR EHFGDDYGIS
VACEPDCFTR ITLRLPLEED A