Gene SeD_A2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2488 
Symbol 
ID6875281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2369270 
End bp2370235 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content61% 
IMG OID642785569 
ProductPfkB family kinase 
Protein accessionYP_002216227 
Protein GI198244551 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG CACGGTTGCT GACATTATTA CCGACCCTGC ATACCCGGCG TCCGCTCACC 
GTTATCGGCG CGGCAGTGAT CGATATCATT GCCGACGCCT GGACGTTGCC GCGTCGCGGA 
GGCGATATTG AACTGCAACA ACAGAGCGTC AATGTCGGCG GCTGTGCGCT GAATATTGCC 
GTGGCGTTGA AACGACTGGG GATTGACGCC AGCAATGCGC TGCCGCTGGG CCAGGGCGTG 
TGGGCGGAGA GGATTCGCCG CCGTCTGGCA AAAGAGGGAT TATCCAGCGT GATTGACGCG 
GTTGAAGGAG ATAACGGCTG GTGTCTGGCG TTAGTCGAAC CGGATGGCGA ACGCACGTTT 
ATGTCTTTTA GCGGCGTGGA AAACCAGTGG AATGCGGACT GGCTGTCGCA GCTCAGGACA 
CCGCGGGGCA GTCTTGTCTA CCTGTCCGGC TATCAACTGG CCTCGTCCTG TGGCGAGCCA 
CTGATCCAGT GGCTGGAAAC CGTCGACGAT GTAACGCCTT TTATCGATTT TGGCCCGCGA 
ATCGGTGATA TTACAGACGA TGCAATGGCG CGCATTATGG CCTGCCGGCC CATCGTATCC 
CTCAATCGCC AGGAAGCCAT CATCGCCGCG GAACGCGCCG GGCTTGCGAC CGATACCCGC 
ACTTTCGGCG AAGCATGGGT AAAACGCTTT TCCGCGCCGC TGGTGGTGCG CCACGATAAA 
GACGGAGCGT GGTATTTTAG CGCGCAATCT TCCGGCGTTG TGCCAGCGTT TCCGGCAACC 
GTGGTGGATA CCATCGGCGC AGGCGACAGC CATGCTGGCG GCGTGCTGGC AGGACTGGCG 
TCAGGCTGGT CGCTCGCGGA TGCCGTACTG CTGGGAAATG CGGTGGCGAG CTGGGTGGTC 
GGGCATCGCG GCGGCGACTG CGCGCCCACG CGCGAGGCGC TACTCCTCGC ACACAAAAAC 
GTATAG
 
Protein sequence
MNGARLLTLL PTLHTRRPLT VIGAAVIDII ADAWTLPRRG GDIELQQQSV NVGGCALNIA 
VALKRLGIDA SNALPLGQGV WAERIRRRLA KEGLSSVIDA VEGDNGWCLA LVEPDGERTF 
MSFSGVENQW NADWLSQLRT PRGSLVYLSG YQLASSCGEP LIQWLETVDD VTPFIDFGPR 
IGDITDDAMA RIMACRPIVS LNRQEAIIAA ERAGLATDTR TFGEAWVKRF SAPLVVRHDK 
DGAWYFSAQS SGVVPAFPAT VVDTIGAGDS HAGGVLAGLA SGWSLADAVL LGNAVASWVV 
GHRGGDCAPT REALLLAHKN V