| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2481 |
|---|
| Symbol | |
|---|
| ID | 6871151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 2361307 |
|---|
| End bp | 2362668 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642785564 |
|---|
| Product | peptidase, U32 family |
|---|
| Protein accession | YP_002216222 |
|---|
| Protein GI | 198242901 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.433184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC CAGAACTTCT TTCGCCGGCG GGAACGCTGA AAAATATGCG TTACGCTTTC
GCTTACGGTG CCGATGCCGT CTATGCGGGC CAACCACGCT ACTCTTTACG CGTGCGTAAT
AACGAATTCA ATCACGAAAA TTTGCAGCTT GGCATCAACG AAGCCCACGC GCTCGGAAAA
AAATTCTACG TGGTGGTGAA CATCGCCCCG CATAACGCCA AGCTCAAAAC CTTTATCCGT
GACCTGAAAC CCGTCGTCGA GATGGGCCCG GATGCGCTGA TCATGTCCGA TCCAGGGTTG
ATTATGCTGG TACGCGAGCA CTTCCCGGCA ATGCCGATTC ACCTGTCGGT ACAGGCTAAC
GCCGTAAACT GGGCGACGGT AAAATTCTGG CAGCAGATGG GGCTGACCCG CGTGATTCTC
TCCCGCGAGC TGTCACTGGA AGAGATTGAG GAAATTCGCC AGCAGGTGCC GGATATGGAA
ATAGAAATTT TCGTCCACGG CGCGCTATGC ATGGCCTATT CCGGTCGCTG CCTGCTTTCC
GGCTACATCA ATAAACGCGA TCCGAATCAG GGCACCTGCA CCAATGCCTG CCGTTGGGAA
TATAACGTGC AGGAAGGAAA AGAAGACGTT GTCGGCAACA TCGTGCATAA GCATGAACCG
ATTCCGGTAC AGAACGTTGA GCCGACGCTC GGTATCGGCG CGCCGACGGA TAAAGTGTTT
ATGATAGAAG AGGCCCAAAG ACCGGGCGAA TACATGACCG CGTTCGAAGA CGAGCATGGC
ACCTATATCA TGAACTCAAA AGATTTGCGC GCTATCGCCC ACGTGGAGCG CCTGACGAAA
ATGGGCGTCC ACTCGCTGAA AATCGAAGGC CGCACCAAAT CCTTTTATTA CTGCGCCCGT
ACCGCGCAGG TCTACCGTAA GGCCATCGAC GACGCCGCCG CGGGTAAACC TTTCGACCCT
ACGCTGCTGG AAACGCTGGA AGGTCTGGCT CATCGCGGCT ATACCGAAGG TTTCCTGCGT
CGCCATACGC ACGACGATTA CCAGAATTAC GAGTACGGGT ACTCCGTTTC CGAACGCCAG
CAATTTGTCG GCGAGTTCAC CGGTGAGCGT AAAGGCCAAC TGGCGGCCGT GGCGGTGAAG
AATAAATTCT CCGTTGGCGA TAGTCTGGAG CTGATGACAC CGCAGGGAAA TATCAATTTC
ACCCTGGAAC AGATGGAGAA CGCCAAAGGA GACGCTATGC CGGTGGCACC CGGCGATGGC
TATACCGTCT GGATGCCCGT CCCGCAGGAC GTTACGCTGG ATTACGCACT ATTGATGCGT
AATTTCTCAG GCGAATCAAC GCGTAACCCC CATGGTAAGT AG
|
|---|
| Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NEFNHENLQL GINEAHALGK
KFYVVVNIAP HNAKLKTFIR DLKPVVEMGP DALIMSDPGL IMLVREHFPA MPIHLSVQAN
AVNWATVKFW QQMGLTRVIL SRELSLEEIE EIRQQVPDME IEIFVHGALC MAYSGRCLLS
GYINKRDPNQ GTCTNACRWE YNVQEGKEDV VGNIVHKHEP IPVQNVEPTL GIGAPTDKVF
MIEEAQRPGE YMTAFEDEHG TYIMNSKDLR AIAHVERLTK MGVHSLKIEG RTKSFYYCAR
TAQVYRKAID DAAAGKPFDP TLLETLEGLA HRGYTEGFLR RHTHDDYQNY EYGYSVSERQ
QFVGEFTGER KGQLAAVAVK NKFSVGDSLE LMTPQGNINF TLEQMENAKG DAMPVAPGDG
YTVWMPVPQD VTLDYALLMR NFSGESTRNP HGK
|
|---|
| |