Gene SeD_A2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2463 
Symboludk 
ID6874470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2339181 
End bp2339822 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content47% 
IMG OID642785551 
Producturidine kinase 
Protein accessionYP_002216209 
Protein GI198245180 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.92076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.601786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC AGTCTCATCA GTGCGTCATT ATCGGTATCG CTGGCGCATC GGCTTCCGGC 
AAGAGTCTTA TTGCCAGTAC CCTTTACCGC GAATTGCGTG AACAAGTGGG TGACGAACAT 
ATTGGCGTTA TTCCCGAAGA CAGTTATTAC AAAGATCAAA GCCATCTGTC GATGGAAGAA 
CGCGTAAAAA CTAACTATGA CCATCCGAAT GCGATGGATC ACAGCCTGCT ATTTCAGCAT 
CTTCAGGCGC TCAAGCGCGG TTCGGCGATT GAATTACCGG TATACAGTTA TGTTGAGCAT 
ACCCGTATGC AGGAAACGGT TCGCGTAGAA CCGAAGAAAG TGATTATTCT TGAAGGTATT 
CTGTTACTGA CCGACGCGCG TTTGCGTGAA GAGATGAACT TCTCTATTTT TGTCGATACG 
CCGCTGGATA TCTGTTTGAT GCGCCGTATC AAACGCGATG TGAACGAGCG TGGTCGCTCA 
ATGGATTCGG TGATGGCGCA ATATCAGAAA ACGGTGCGTC CGATGTTCCT GCAATTTATT 
GAGCCTTCCA AACAATATGC GGATATTATC GTGCCGCGCG GCGGTAAAAA CCGCATCGCT 
ATTGATATTC TGAAAGCGAA AATCAGCCAG TTCTTTGAAT AA
 
Protein sequence
MTDQSHQCVI IGIAGASASG KSLIASTLYR ELREQVGDEH IGVIPEDSYY KDQSHLSMEE 
RVKTNYDHPN AMDHSLLFQH LQALKRGSAI ELPVYSYVEH TRMQETVRVE PKKVIILEGI 
LLLTDARLRE EMNFSIFVDT PLDICLMRRI KRDVNERGRS MDSVMAQYQK TVRPMFLQFI 
EPSKQYADII VPRGGKNRIA IDILKAKISQ FFE