Gene SeD_A2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2456 
Symbol 
ID6871606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2330523 
End bp2332682 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content54% 
IMG OID642785545 
Producttyrosine kinase 
Protein accessionYP_002216203 
Protein GI198243583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.0354521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA AAGTAAAACA ATCTGCGGCG GTTACGGGTA GCGATGAAAT CGATATCGGG 
CGCCTGGTCG GAACGGTGAT TGAAGCGCGT TGGTGGGTGT TGGGGACGAC GGCCATATTT
GCGCTGTGCG CGGTAATTTA TACGTTCTTC GCCACGCCCA TCTATAGCGC CGATGCGCTG
GTGCAGATTG AACAAAACGC CGGTAATTCG CTGGTACAGG ATATCAACAG TGCATTAGCG
AATAAGCCGC CGGCTTCCGA TGCGGAAATT CAGCTCATTC GATCGCGCCT GGTGCTTGGG
AAGACCGTTG ACGATCTGGA TCTGGATATT GCCGTCACCA AAAACACCTT TCCGCTGTTC
GGCGCCGGGT GGGAACGGCT GATGGGGCGT CACAATGAAA TGGTGAAAGT CACGACATTC
ACCCGACCAG AGACGATGAG CGGACAGATC TTCACCCTCA AAGTGCTGGG CGACAAACGT
TATCAGTTGG TTAGCGACGG CGGATTTAGC GCGCAGGGCG TTGTGGGCCA GCCACTCAAT
AAAGACGGCG TGACGATGCA GGTAGAGGCG ATTGACGCCC GTCCTGATAC AGAATTTACG
GTGAGTAAAT TCTCAACGCT TGGCATGATT AATAACCTGC AAAATAACCT CACCGTAACG
GAAACCGGCA AAGATACCGG CGTTCTGAGC CTGACGTTCA CGGGAGAGGA TCGCGACCAG
ATCCGCGAAA TTCTCAACAG TATTACCCGT AACTATCTGC AACAGGATAT TGCGCGGAAA
TCTGAAGAGG CGGGGAAGAG CCTGGCGTTT CTGGCAAAAC AACTGCCGGA AGTCCGCAGC
CGTCTGGATG TGGCGGAAAA CAAGCTAAAC GCTTTCCGCC AGGATAAAGA CTCGGTGGAT
TTACCGCTGG AGGCGAAGGC GGTGCTCGAT TCGATGGTTA ATATCGACGC CCAGTTGAAT
GAGTTGACGT TTAAAGAGGC GGAAATTTCC AAGCTCTTTA CCAAAGCGCA TCCGGCCTAC
CGCACCCTGC TGGAAAAACG TAAAGCGCTG GAAGATGAAA AAGCCAAACT GAACGGGCGG
GTGACGGCAA TGCCGAAAAC CCAGCAGGAG ATTGTGCGTT TGACCCGCGA TGTGGAGTCC
GGCCAGCAGG TTTATATGCA ACTGCTTAAT AAACAGCAGG AGCTGAAAAT CACCGAAGCC
AGCACCGTTG GCGATGTGCG CATCGTTGAC CCGGCGATTA CCCAGCCGGG CGTGCTGAAG
CCGAAAAAGG CGTTGATTAT TCTCGGCAGC ATTATTCTGG GATTAATGTT ATCGATTGTC
GGCGTGCTGC TGCGCTCGCT GTTTAATCGC GGTATCGAAA GCCCGCAGGC GCTGGAGGAG
CACGGGATCA GCGTCTATGC CAGTATTCCG CTGTCGGAAT GGCAAAAAGC GCGCGATAGC
GTCAAAACCA TTAAAGGGAT TAAGCGTTAC AAGCAGAGCC AACTGCTGGC GGTGGGCAAT
CCGACCGATC TGGCGATTGA GGCGATTCGC AGCCTGCGCA CCAGCCTCCA TTTCGCCATG
ATGCAGGCGC AAAATAATGT ACTCATGCTC ACAGGCGTCA GCCCCTCTAT CGGTAAAACC
TTTGTTTGCG CCAACCTGGC GGCCGTCATC AGCCAGACGC ATAAACGGGT ATTACTGATC
GACTGCGATA TGCGCAAGGG CTACACCCAT GAACTGCTCG GCACCAATAA CGTGGACGGC
TTATCTGACA TTCTGGCGGG CAAAGGCGAG ATAGCCTCCT GCGCGAAACC TACGGCGATC
GCTAATTTTG ATCTTATTCC GCGCGGTCAG GTGCCGCCTA ATCCATCGGA ACTGCTGATG
AGCGAGCGCT TCGGCGAGCT GATCGCCTGG GCAAGCAGCC GCTACGACCT GGTATTAATC
GACACGCCGC CGATTCTGGC CGTGACGGAC GCCGCGATTG TGGGTCGCCA CGTCGGGACG
ACGCTGATGG TGGCGCGTTA TGCCGTCAAC ACCTTAAAAG AGGTGGAAAC CAGTCTGAGC
CGTTTTGACC AGAATGGCAT TCAGGTCAAA GGCGTCATTC TCAACTCCAT TTTTCGCCGG
GCGACGGGCT ACCAGGATTA TGGTTATTAC GAGTATGAAT ACCAGTCAGA TTCCAAATAA
 
Protein sequence
MTEKVKQSAA VTGSDEIDIG RLVGTVIEAR WWVLGTTAIF ALCAVIYTFF ATPIYSADAL 
VQIEQNAGNS LVQDINSALA NKPPASDAEI QLIRSRLVLG KTVDDLDLDI AVTKNTFPLF
GAGWERLMGR HNEMVKVTTF TRPETMSGQI FTLKVLGDKR YQLVSDGGFS AQGVVGQPLN
KDGVTMQVEA IDARPDTEFT VSKFSTLGMI NNLQNNLTVT ETGKDTGVLS LTFTGEDRDQ
IREILNSITR NYLQQDIARK SEEAGKSLAF LAKQLPEVRS RLDVAENKLN AFRQDKDSVD
LPLEAKAVLD SMVNIDAQLN ELTFKEAEIS KLFTKAHPAY RTLLEKRKAL EDEKAKLNGR
VTAMPKTQQE IVRLTRDVES GQQVYMQLLN KQQELKITEA STVGDVRIVD PAITQPGVLK
PKKALIILGS IILGLMLSIV GVLLRSLFNR GIESPQALEE HGISVYASIP LSEWQKARDS
VKTIKGIKRY KQSQLLAVGN PTDLAIEAIR SLRTSLHFAM MQAQNNVLML TGVSPSIGKT
FVCANLAAVI SQTHKRVLLI DCDMRKGYTH ELLGTNNVDG LSDILAGKGE IASCAKPTAI
ANFDLIPRGQ VPPNPSELLM SERFGELIAW ASSRYDLVLI DTPPILAVTD AAIVGRHVGT
TLMVARYAVN TLKEVETSLS RFDQNGIQVK GVILNSIFRR ATGYQDYGYY EYEYQSDSK